| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3018 |
|---|
| Symbol | |
|---|
| ID | 5900473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3285949 |
|---|
| End bp | 3287961 |
|---|
| Gene Length | 2013 bp |
|---|
| Protein Length | 670 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641563519 |
|---|
| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| Protein accession | YP_001684643 |
|---|
| Protein GI | 167646980 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.27509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGA CTGAAACCTC TCCCAAACCG CGAAAAAAGG CCGTCTCCAA GGCGGATGCG
ACGCCGACCG CCGCGAAGAC CAAGTCCAAG GCCGCGCCGA AGGCTCCTCC GAAAATCGCC
CCCGAACCGG CAGCCCGCGC CAAGCCCGCC GAATCGGCCT CGCGCCGCGA ACCGCCTCGG
GCGGCGGCGC CCACCGGCGC CATGCCCGAG CTCGAGGCCC TCCTGTCGCC CGACCAGCGC
CAGATGCTCG AGACCCTGTC GGCCAACCTG GCCCGCGCCG CCGTCACCGC CCAGGGGGCG
ATCGCCGAGG CCGCCCTGCG CCAGGCCGAC CGGCCGGCGG CCCTGAGCGC CGACCCGTTC
CACGTCGGCC CCGCCTTCAA CGAGGTGATG ACCAGCCTGG CCGCCCAGCC CGACCGCCTG
CTGCGGGCCC AGGCCGACCT CTTTACCCGC TACATGGACC TGTGGCAGTC GGCCGCCCGC
AGAATGACCG GCGAGCAGAC CCAACCCATC GTCGCGCCAA CCAGCGGCGA CAAGCGGTTC
AGCGACCCCG ATTGGGCCAC CAATCCGATG TTCGACATGA TGAAGCAGAG TTACCTGCTC
TCTTCCAATT GGCTGAACGA TCTGGTGTCG CAGGCCGAGG GCGTCGATCC CAGCGCCAAG
CGCCGGGTCG AGTTCTTCAC CAAGATGCTG ACCGACGCCT TCTCGCCGTC GAACTTCCTG
ATCTCCAACC CGGCCGCCCT GCGCGAGGTG ATGCAGAGCA AGGGCGAGAG CCTGGTGCGC
GGCATGCGAA ACTTCGCCGC CGATCTCGAG CGCGGCGGCG GCCAACTGGC CATCAGCCAG
ACCGATCTGG CCAAGTTCAA GGTCGGCGAG AATGTCGCCA CCGCCCCCGG CAAGGTGGTC
TATCAGAACG ACATCCTGCA GCTGCTGCAG TTCGATCCGA CCACGGAGCA GGTGCACGAG
ATCCCGCTGC TGATCTTCCC GCCGTGGATC AACAAGTTCT ATATCCTCGA CCTGCGGCCC
GAGAACTCGA TGATCCGCTG GCTGACCGGC CAGGGCTTCA CGGTGTTCGT GGCCTCGTGG
GTCAATCCCG ACAGTGAACA AGCGACCAAG ACCTTCGAGG ACTACATGTT CGAGGGGATC
TACGACGCCA GCCAGCAGGT GATGAACCAG ACCGGCGTCA ACAAGGTCAA CACCGTCGGC
TACTGCATCG GCGGCACCCT GCTGTCCTGC GCCCTGGCCC ACATGGCGGC CAAGGGCGAC
AAACGGATCA ATTCGGCCAC CTTCTTCGCC GCCCAGCAGG ACTTCTCCGA GGCCGGAGAC
CTGCTGCTGT TCACCGACGA GGAATGGCTG AAGTCGATCG AGACGCTGAT GGACCAGAAG
GGCGGCTACC TGCCCAGCCA GTCGATGGCC GACACCTTCA ACAGCCTGCG CGGCAACGAC
CTGATCTGGT CGTTCTTCAT CAACAACTAC CTGATGGGCA AGGAGCCGCG GCCCTTCGAC
CTGCTGTTCT GGAACGCCGA CCAGACGCGC ATGCCCAAGG CCCTGCACCT GTTCTATCTG
CGCAACTTCT ACAAGGACAA CGCCTTGACC ACGGGTCACC TGACCCTGGG CGGCGTGAAG
CTGGACCTGT CGAAGGTCAA GACCCCGATC TATGTCCAGT CATCCAAGGA CGACCACATC
GCCCCGTTCC GCAGCGTCTA TCGCGGCGCG CGAGCCTTCG GCGGGCCGGT CACCTTCACC
ATGGCCGGCT CGGGCCACAT CGCCGGGGTG ATCAACCATC CCGACGCCAA GAAGTACCAG
CACTGGACCA ACGACCAGTT GCCCGGCTCG GTCGAGGACT GGCGCGCCGG CGCGGTCGAG
CATCCCGGCT CGTGGTGGCC GCACTGGGCG ACCTGGCTGA AGGCCCGATC AGGCAAGCTG
GTCCCGGCCC GCGATCCGGC CAAGGGCCTG CTGAAACCGT TGGAGGACGC GCCGGGCAGC
TTCGTGCGGG TGCGGTCGAA CGCGGCGGCC TGA
|
|---|
| Protein sequence | MATTETSPKP RKKAVSKADA TPTAAKTKSK AAPKAPPKIA PEPAARAKPA ESASRREPPR
AAAPTGAMPE LEALLSPDQR QMLETLSANL ARAAVTAQGA IAEAALRQAD RPAALSADPF
HVGPAFNEVM TSLAAQPDRL LRAQADLFTR YMDLWQSAAR RMTGEQTQPI VAPTSGDKRF
SDPDWATNPM FDMMKQSYLL SSNWLNDLVS QAEGVDPSAK RRVEFFTKML TDAFSPSNFL
ISNPAALREV MQSKGESLVR GMRNFAADLE RGGGQLAISQ TDLAKFKVGE NVATAPGKVV
YQNDILQLLQ FDPTTEQVHE IPLLIFPPWI NKFYILDLRP ENSMIRWLTG QGFTVFVASW
VNPDSEQATK TFEDYMFEGI YDASQQVMNQ TGVNKVNTVG YCIGGTLLSC ALAHMAAKGD
KRINSATFFA AQQDFSEAGD LLLFTDEEWL KSIETLMDQK GGYLPSQSMA DTFNSLRGND
LIWSFFINNY LMGKEPRPFD LLFWNADQTR MPKALHLFYL RNFYKDNALT TGHLTLGGVK
LDLSKVKTPI YVQSSKDDHI APFRSVYRGA RAFGGPVTFT MAGSGHIAGV INHPDAKKYQ
HWTNDQLPGS VEDWRAGAVE HPGSWWPHWA TWLKARSGKL VPARDPAKGL LKPLEDAPGS
FVRVRSNAAA
|
|---|
| |