Gene Caul_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3005 
Symbol 
ID5900460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3271278 
End bp3272270 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content70% 
IMG OID641563502 
Productpeptidase U32 
Protein accessionYP_001684630 
Protein GI167646967 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.21476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA TCGAGCTCGT CTGCCCGGCC GGATCGCCGG CCATGCTGCG CGCCGCCATC 
GAGGCCGGGG CCGACAGCGT CTATTGCGGT CTGCGCGACG AAACCAACGC CCGCAACTTT
CCCGGCCTCA ACTTCTCGCC CCAGGAGTTG GAGAGCGCGG CGGCCTGGGC CCACGAGCGA
GGCGCCAAGG TGCTGGTGGC GATCAACACC TTCGCCAGGG TTGGCGCCGT CGATACCTGG
CGCGCCTCGG TCGACGCCGC GGCCCGGGCG GGCGCGGACG CGATCATCGT CGCCGACCTT
GGAGTCCTGG CCTATGCGCG CGACGCCCAT CCCCAGTTGA GGCTGCATCT GTCGGTGCAG
GCCGCCGCCG GCTCGATCGA CGCCATCGAC TACTACGCCA AGACCTACGG CGTGCGCCGC
GTGGTGCTGC CCAGGGTGCT GTCGGCCCCG GAGATCGCCG CCCTCAACCG GCAGATCGGC
GTCGAGACCG AGGCCTTCGT ATTCGGCGGC TTGTGCGTGA TGGCCGAGGG GCGCTGCGCC
CTGTCGTCTT ACGCCACCGG TCGTTCGCCC AATCTGTCGG GCGTCTGCTC ACCGCCCGAG
GCGGTGTCGT TCGAGGATGA GGAGGGCCAG CTGACCTCGC GCCTGGCCGG CTTCACCCTC
GATCGGTTCG CGGCCGGCGA GGCCGCCGGC TATCCGACCC TGTGCAAGGG GCGCTTCAAG
ACGGGGCACG AGGCCTCCTA CCTGTTCGAG GAGCCGACCA GCCTCAACGC CATGGGCCTG
TTGGCCGATC TGGCCAAGGC CGGCGTAACC GCCGTGAAGA TCGAAGGGCG CCAGCGCGGC
AAGGCCTATG TCGCGCGGGT GACCGCCGCC TTCCGGGCCG CGATCGATGC CCTCGACCGG
GGCGAACCGA CGGGACCCTA CGAGCATCTC TTGTCGAGCC TGGCCGAAGG CGGGCGCGAG
ACCGCCGGCG CCTATCGGAA GACCTGGCGA TGA
 
Protein sequence
MASIELVCPA GSPAMLRAAI EAGADSVYCG LRDETNARNF PGLNFSPQEL ESAAAWAHER 
GAKVLVAINT FARVGAVDTW RASVDAAARA GADAIIVADL GVLAYARDAH PQLRLHLSVQ
AAAGSIDAID YYAKTYGVRR VVLPRVLSAP EIAALNRQIG VETEAFVFGG LCVMAEGRCA
LSSYATGRSP NLSGVCSPPE AVSFEDEEGQ LTSRLAGFTL DRFAAGEAAG YPTLCKGRFK
TGHEASYLFE EPTSLNAMGL LADLAKAGVT AVKIEGRQRG KAYVARVTAA FRAAIDALDR
GEPTGPYEHL LSSLAEGGRE TAGAYRKTWR