Gene Caul_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2997 
Symbol 
ID5900452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3259583 
End bp3261697 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content69% 
IMG OID641563494 
Productphospholipase C, phosphocholine-specific 
Protein accessionYP_001684622 
Protein GI167646959 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3511] Phospholipase C 
TIGRFAM ID[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCAG TAGATCGTCG CGCCTTCCTG CTCTCGGCCA CCGCCGCCCT GACTTTGCCG 
CCCGCCGTCG CCAAAGCCCT GACCATCGAC GCCGACGTGC GCGCCGGCAC GCTGAAGGAC
GTGGAGCATG TGGTGATCCT GATGCAGGAA AACCGCGCCT TCGATCACTA TTTCGGCGTG
ATGAACGGTG TCCGGGGTTT TGGCGACCGC TTCCCGATTC CCATGCCCGA CAGCCAGGGC
GTGCGCCACA AGACGGTCTG GACCCAGGTC AACGACACTG GAAAGGGCGG GCCGCCGCTG
GTCTCGCCCT TCGCATTGGA CACCATCGCG ACCTTCGCCC ACATGCGAGT CGAGGGCACG
CCTCACGGCT GGTCGGACGC CCAGGCGGCC TGGAACGAGG GCCGCATGAA CCGCTGGCCG
GCCGCCAAGA CCGAGCGGGC CATGGGCTAT TATCGCCGCG AAGACATCCC CTTCCAATAT
GCGATGGCCG ACGCCTTCAC CGTCTGCGAC GCTTATCACT GCTCGACCCA GACCGGCACC
AACACCAACC GCCTGTTCCT TTGGACCGCC ACCAACGATC CATCCGGCCA GCAGGGCGGC
CCCTCGATCT CCAACAGCCA CGACAGCCTG GTGGCCGATG GCGGGGCCGC CGATCCCTAT
CGTTGGACGA CCTATGCCGA GCGGCTGCTG GCGGCCGGCG TGACCTGGCG CATCTATCAG
GACATGGCCG ACAATTTCAC GGACAACCCC ACGGCCGGGT TCAAGACCTA TCGCGACAGT
CACGCCGCCT TGCCGGGATC CGACCCACGC CTGAAGGCGC TGGCGCTGTC GACCCGCAAG
CTGGACGGCC TGCGCGAGGA CGTGCTGGCC GGCGCCTTGC CGCAGGTGTC CTACATCGTC
GCCCCGGCCG CCGATTCCGA GCACCCCGGT CCCTCCAGCC CCGCCCAGGG CGCGGACTAC
ACGGCTCGGG TGATCGACGC CCTGACCGCC GATCCCAAGG TCTGGGCGCG CACCGTGCTG
CTGGTGATGT TCGACGAGAA CGACGGTTTC TTCGACCACG TCCCGCCGCC AGCCCCGCCG
TCGAAGGCCG CGGACGGAAC GGTCCTGGGC GCCTCGACGG TCGACACCGC CGGCGAGTAT
CATCTGGTGC GCAATCCCAC CGAGGCCTCG GCCGAACGCG ATGAGCTGAT GGGCCGCCCC
TATGGTCTGG GTCCAAGGGT CCCGCTGTAT GTGCTGTCGC CCTGGAGCCG GGGCGGCTGG
GTCAATTCGC AGGTGTTCGA CCACACCTCG GTGATCCGTT TTCTGGAGAC CCGGTTCGGG
GTGGCCGAAC CCAACATCTC GCCCTGGCGG CGGGCGGTTT GCGGCGACCT GACCACCACC
TTCGACTTCA AGACTCCCAA CGTCGCGCCC TTCGCCAAGG CCCTGCCCGC CACCCAGGCC
CTGGCCAATC GCGCCGCGGC GCTGAAGGAC ACCACCGTGC CGCCGACCCC GGCCATCCCG
GCGGTCCCAA CCCAGGCGAC AGGTCCTCGC CCCTCGCGCG CCCTGCCCTA CGCGCCGCGC
ATCGACGAGG GCGCACAAGA CGGCCGCCTG ACTCTGACGC TCGCCAACGA CGGATCGCAG
GCGGCGGTTC TTCACGTCTA TGACCGCCTG CGCCTCGACC AGCCGCCGCG TCGCTACACC
GTCGAACCCG GCAAGCAGTC CAACGACGTC TGGCCCGCCG GCGCCTACGA TCTGTGGGTG
CTGGGTCCCA ACGGCTTCCA CCGCCACTTC ATCGGGGGTG CCCCCGGCGA GGATCCGATC
CTGCGCGTCC AGGCGTCGCC GACCGCGGGC CTGGTCGGCC TGACCCTGCG CAATCCCGGC
GGCGCGGCCA AGACCCTGGC CGCCACGCCC AACGCCTATG GAACGGCCTT CCGCCCCTGG
AAAATGGCGC TGCCGCCGGC GCGCGAGATC CGCAAGGACC TGCGCGTGAA GGCCACCGGG
GGCTGGTACG ACGTGTCGAT CGAAACCGAC GGCTACCTGC GCCGCGTGGC GGGACGGCTG
GAGATGGGCG TCGATTCCAT CAGCGATCCA GCCATGGGCG GAATGGCGAT CATGGATCAG
CCGTTTCGCG GGTGA
 
Protein sequence
MPSVDRRAFL LSATAALTLP PAVAKALTID ADVRAGTLKD VEHVVILMQE NRAFDHYFGV 
MNGVRGFGDR FPIPMPDSQG VRHKTVWTQV NDTGKGGPPL VSPFALDTIA TFAHMRVEGT
PHGWSDAQAA WNEGRMNRWP AAKTERAMGY YRREDIPFQY AMADAFTVCD AYHCSTQTGT
NTNRLFLWTA TNDPSGQQGG PSISNSHDSL VADGGAADPY RWTTYAERLL AAGVTWRIYQ
DMADNFTDNP TAGFKTYRDS HAALPGSDPR LKALALSTRK LDGLREDVLA GALPQVSYIV
APAADSEHPG PSSPAQGADY TARVIDALTA DPKVWARTVL LVMFDENDGF FDHVPPPAPP
SKAADGTVLG ASTVDTAGEY HLVRNPTEAS AERDELMGRP YGLGPRVPLY VLSPWSRGGW
VNSQVFDHTS VIRFLETRFG VAEPNISPWR RAVCGDLTTT FDFKTPNVAP FAKALPATQA
LANRAAALKD TTVPPTPAIP AVPTQATGPR PSRALPYAPR IDEGAQDGRL TLTLANDGSQ
AAVLHVYDRL RLDQPPRRYT VEPGKQSNDV WPAGAYDLWV LGPNGFHRHF IGGAPGEDPI
LRVQASPTAG LVGLTLRNPG GAAKTLAATP NAYGTAFRPW KMALPPAREI RKDLRVKATG
GWYDVSIETD GYLRRVAGRL EMGVDSISDP AMGGMAIMDQ PFRG