| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2987 |
|---|
| Symbol | |
|---|
| ID | 5900442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3245363 |
|---|
| End bp | 3247489 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641563484 |
|---|
| Product | phospholipase C, phosphocholine-specific |
|---|
| Protein accession | YP_001684612 |
|---|
| Protein GI | 167646949 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTG ACCGCCGCGC GTTCCTGCGT TCCGCCGCCA TAACCGCCAC GACCATCGGC
CTGCTGCCGA CCACGGTCGC CAAGGCCATG GCGATCCCCG CGCGCCACCG CACCGGCACG
ATCATGGACG TCGAGCACGT GGTGATCTTC ATGCAGGAGA ACCGCGCGTT CGATCACTAT
TTCGGCGCGC TGAACGGCGT GCGCGGCCTG GGCGATCCGC GCCCGCAGCG GCTGCCCGGC
GGCGCCTCGG TCTGGCGCCA GCCCAGCCGC GAGCATCCGG ACGGCTTCGT CGCGCCGTTC
CATGGCGACG CCTCGGCGAC CAACGCCTAC ACCGTCGATG GCTCCGACCA GGGCCATCAG
GCGGCGATCA CCGTCGTCAA CGGCGGCCGC TATGACCAGT GGGGCCACAG CGGCGAACTG
CACAAGCGGA TGGTCTATTA CAAGGCCTCG GATCTGCCGT TCTATCACGC CCTGGCCAGC
GCCTTCACGG TCTGCGACGC CTATCATTGC TCGACCCTGA CCCAGACCTA CCCCAACCGC
CTGCACCTTT GGACGGGTTG CAACGGCGGC GGCAAGGTGG GCGGCGATCC GGAGATGAGC
AACTACGGCG AGGACGAGAC GCCCAGCGCC GACATGGCCG AGGACAAGGC CATGGCCAAG
GGGCCGTACG ACTGGACGAC CTATGCCGAG CGCCTGCAGG CCGCCGGGAT CAGCTGGAAG
GTCTACCAGG AATACGACAA TTTCGGCGAC AACATCCTGT CGGTGTTCAA GCCCTTCCGG
CCGTGCGCCA AGGACTCGCC GCTATACGAG CGCGGCCGGT CGTGGGTGTC GGAAGGCAAG
AGCGGCGCCG ACCGCACGCG TTCGGACGGC CAGCAACTGG TCGAGGCGTT CCGCGCCGAC
GTCGCCGCCG ACCGCCTGCC GCAGGTGTCG TGGATCGTCA CCGCCGCCGA CCTGTCCGAG
CACCCCCAGG CCGAGCCCTC GAAGGGCGAG CACGTCTGCG CCGAGTTGAT CAAGGCGCTG
GTCGACCATC CCGAGGTGTT CGCCAAGACC GTGTTCATCG TCAATTACGA CGAGGCTGGC
GGCTTCTATG ACCACATGCA GCCGCCCATG CCGCCGTTGA CGCCCGAGCA AGGCTGGAGC
TCGGTGCCGG TGACCGGCGA GATCAAGGAC TACGGCCAGT CCGAGGTCGC CAATCAGGGC
GCCCACCCTC TGGGCCTGGG CATCCGCGTG CCGGCGATCA TCGTCTCGCC CTGGAGCCGC
GGCGGCTTCG TCTGCTCGGA GGTGTTCGAC CACACCTCGA CCCTGCAATT CCTGGAAAAG
CGCTTCGGCG TCCGCGAGGA CAACATCAGT GATTGGCGCC GCGCGGTCTG CGGCGACCTG
ACCTCGGCCT TCGACTTCGC CGCGCCCAAC CAGGACTGGA CCGCCCTGAC CCTGCCGGCG
ACCGCCGACT ATATGCGACG CGCCGCCCGC TCCAAGGCCG CGCCGAGCCT GCGAATTCCC
GCAATCCAAG GCCCCTCGGC CCAGGACGGC CCCCAGCGCG GCGCGCGTCC CCTGCCCTAC
GCCCTGTCGG CCGACGCCCG GGTGAAGGAC GGCGCGCTAT GGATCGACCT GGTCAACACC
GGCCGGACGG GGGCGGTGTT CCAGGTGTTC GACAACACCG ATCGCGACGC CCCCTGGCGC
TTCACCTTGG CGGCGGGCCA GGCCTACGCG GCCGGGCACT GGAACAAGCC CGGTCGCCCC
CCCGGACCCT ACGACCTGAC TGTCCAGGGT CCGAACGGCT TCTACCGCCG TTTCGCCGGC
GACACGTCGC GGTCTCAGCC GCTCGTCACG GTCGCCGCCG ACGCCCGCTC GCGCCTGGTC
GTCAGCCTGG CGGGCGGTCA GTCCGGCCGG GTCACGGCCC GGATGGACGA CGCCTATCCG
CTGGTCGAGG GCGACGCCCG TCAGGATCTC GTGCTGAAGC CCAAGGGCGT CGTTCGCTCA
GTTTGGGACC TGCGCGGCAG CGACCACTGG TACGACCTGA CCCTGACCCT GTCCGACGAT
CCCTCGTTCA CCCAACGCCT CGCCGGTCAC CTGGAAACGG GACGGGTCAG CCGCACCGAT
CCGGGCATCG GGCAGATGCG CCTGTGA
|
|---|
| Protein sequence | MTTDRRAFLR SAAITATTIG LLPTTVAKAM AIPARHRTGT IMDVEHVVIF MQENRAFDHY
FGALNGVRGL GDPRPQRLPG GASVWRQPSR EHPDGFVAPF HGDASATNAY TVDGSDQGHQ
AAITVVNGGR YDQWGHSGEL HKRMVYYKAS DLPFYHALAS AFTVCDAYHC STLTQTYPNR
LHLWTGCNGG GKVGGDPEMS NYGEDETPSA DMAEDKAMAK GPYDWTTYAE RLQAAGISWK
VYQEYDNFGD NILSVFKPFR PCAKDSPLYE RGRSWVSEGK SGADRTRSDG QQLVEAFRAD
VAADRLPQVS WIVTAADLSE HPQAEPSKGE HVCAELIKAL VDHPEVFAKT VFIVNYDEAG
GFYDHMQPPM PPLTPEQGWS SVPVTGEIKD YGQSEVANQG AHPLGLGIRV PAIIVSPWSR
GGFVCSEVFD HTSTLQFLEK RFGVREDNIS DWRRAVCGDL TSAFDFAAPN QDWTALTLPA
TADYMRRAAR SKAAPSLRIP AIQGPSAQDG PQRGARPLPY ALSADARVKD GALWIDLVNT
GRTGAVFQVF DNTDRDAPWR FTLAAGQAYA AGHWNKPGRP PGPYDLTVQG PNGFYRRFAG
DTSRSQPLVT VAADARSRLV VSLAGGQSGR VTARMDDAYP LVEGDARQDL VLKPKGVVRS
VWDLRGSDHW YDLTLTLSDD PSFTQRLAGH LETGRVSRTD PGIGQMRL
|
|---|
| |