Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2971 |
Symbol | |
ID | 5900426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3226716 |
End bp | 3228500 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641563468 |
Product | poly-beta-hydroxybutyrate polymerase domain-containing protein |
Protein accession | YP_001684596 |
Protein GI | 167646933 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.745288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.158557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG TCCAAATCCC GCCAGGCGCT GGGACGTTCG CCGAGCCTGC GCAAGACTTG GCCGAAGATC CTTGCGACGG CCTGGCCGAC CTTGTCGACC GAACGGCGAG CGCGGCCCTG GCCACCGCCA CGGGCGGCCT GTCGCCGGCC TCGGTCCTGG GCGCCTTCGC CGACTGGGCC ACGCACCTGG CCATCTCGCC GGGACGTCAG TGGCGGTTGG CGGTCAAGGC CGCCCGCAAG ACCGGCCGGC TCACCGATTT CGCCATGCGA GCCTTGTGGG AGGGCGCTGG GGCCACGCCC TGCATCGCGC CCTTGCCGCA GGATCGCCGT TTCGACGATC CGGCCTGGCG CACCTGGCCC TACAACGTGG TGCAGCAGGG ATTTCTCCTC CAGCAGCAAT GGTGGGATGT GGCCTGCACG GGCGTGCCCG GGGTCACCGC GCGCCATGAG GCCATGACCC GCTTCGCCGT CCGCCAGGCG CTCGACACCG TGGCGCCAAG CAACTTCATC GCCACCAATC CGGTCCTCCA GGCCAAGATC GCCACGACCG GCGGGGCCTG CCTGGCCCAC GGCTGGACCA ATTTCGCCGA CGACCTGCGC CGGCTGATCG AACGCAGGGG TCCCGATGGG GTTGAAGCCT TCCGGCCTGG TCATGAGGTG GCTGTCACCC CCGGCCAGGT GGTCTTCCGC AATGACTTGA TCGAGCTGAT CCGTTATGCG CCGACCACCG CAACGGTGCG TCCGCAGCCC ATCCTGATCA CGCCCGCCTG GATCATGAAG TACTACATCC TCGATCTGTC GCCCGGCAAT TCGCTGGTCC GCTGGCTCGT CGATCAGGGC TACTGCGTGT TCATGATCTC CTGGCGCAAT CCCGGCCAGG CGGACCGCGA GTTGACCTTG GACGACTATC GCCGGCTGGG CTTTCTGGCG GCGCTCGACG CGGTGGTGGA GGAGACCGGG GCGGCGAGCA TTCACGCGGT GGGTTATTGC CTGGGCGGAA CCTTGCTGGC CATCGCGGCG GCGGCCATGG CCCGTGACGG CGACGACCGA TTGGCCAGCA TCACCTTGCT GGCCGCCCAG ACCGAATTTA GCGAGCCCGG AGAGCTGGGT CTCTTCATCG ACGAAGGCCA GGTCCGTTTC CTGGAGGACC TGATGTGGTC GCAGGGCTAT CTCGACGCTC GCCAGATGGG TGGGGCGTTC CAGCTGCTGC GTTCCAACGA CCTGATCTGG TCGCGCGTCG TGCGCGAGTA CCTGCTGGGC GAGCGCGCCC CGATGAGCGA CCTGATGGCC TGGAACGCTG ACGGCACGCG TTTGCCTTAC GCCATGCACA GCCAGTACCT GCGCGCGCTT TTCCTTGACG ATGACTTGGC GGAAGGACGG TTTCAGGTCG ATGGGCGGCC GGTGGCCCTG GAGGACATCC GCAGCCCCGT GTTCGCGGTC GGCGCCGAGC GCGACCACGT CGCGCCCTGG CGTTCGGTGT TCAAGATCCA CCTTTCGGTG GGGGCGGCGG TCACCTTCCT TCTGACCAGC GGCGGGCATA ACGCCGGCAT CGTCTCCGAG CCGGGTCGAC CCGGACGCCA TTGGCGGCGT CGCACCCGAC CCGCTGGCGG GCGCTATGTC GGTCCCGAGG CTTGGCTTGA TCTGGCCGAA GCGGGCGAAG GGTCCTGGTG GCCCGCCTGG ACCCAGTGGC TGGACGAGCG GTCGGGCGCG CCGATCGAGC CTGAGGCCCT TCATACGGCC GCGGACCTGG GGCCAGCGCC GGGAACCTAT GTCTTCGGCC GCTAA
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Protein sequence | MSAVQIPPGA GTFAEPAQDL AEDPCDGLAD LVDRTASAAL ATATGGLSPA SVLGAFADWA THLAISPGRQ WRLAVKAARK TGRLTDFAMR ALWEGAGATP CIAPLPQDRR FDDPAWRTWP YNVVQQGFLL QQQWWDVACT GVPGVTARHE AMTRFAVRQA LDTVAPSNFI ATNPVLQAKI ATTGGACLAH GWTNFADDLR RLIERRGPDG VEAFRPGHEV AVTPGQVVFR NDLIELIRYA PTTATVRPQP ILITPAWIMK YYILDLSPGN SLVRWLVDQG YCVFMISWRN PGQADRELTL DDYRRLGFLA ALDAVVEETG AASIHAVGYC LGGTLLAIAA AAMARDGDDR LASITLLAAQ TEFSEPGELG LFIDEGQVRF LEDLMWSQGY LDARQMGGAF QLLRSNDLIW SRVVREYLLG ERAPMSDLMA WNADGTRLPY AMHSQYLRAL FLDDDLAEGR FQVDGRPVAL EDIRSPVFAV GAERDHVAPW RSVFKIHLSV GAAVTFLLTS GGHNAGIVSE PGRPGRHWRR RTRPAGGRYV GPEAWLDLAE AGEGSWWPAW TQWLDERSGA PIEPEALHTA ADLGPAPGTY VFGR
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