Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2964 |
Symbol | |
ID | 5900419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3219398 |
End bp | 3221341 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641563461 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001684589 |
Protein GI | 167646926 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.443547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGTCC CCTCCGCGAT AGCGACGCAA GATCTTCTCG ACGGCATTCT AAAAATCTCG TCCGAAGCCA TCATCGTCAC CGACGAACGT GGCGTGGTTT TGATGTTCAG CGTTGGGGCC GAGACGATCT TCGGCTATCG GGCCGCGGAG ATGATCGGCG CGTCGATAGA GCGCTTGATC CCGCCCGAGG CGCGCGCGCA TCACCGCGAC CATGTCGCGG CGTTCGGCAA GGGGCCGGTC GACACCGTGG TCATGCGTGA GCGCGGCACG ATTCAGGGAC TTCGAAAGGA TGGCGCCCGG TTTGCCCTGG AAGCTTCTCT GTCGCGGTCG ATGACCCGTG AGGGCATGGT GTTCACCACC CTGATCCGAG ACGTCAGCGC AAGGGAGGCC GGACAGGCGG CGGTGGCCGC CTCGGAGCGG CGCTTGCGCA TCGCGCTGCA AAACGCGCGC ATGCACGTCA TCGAGATCGA CTACCAGGCC CAGGTGCTGT CCAAGGCTGG AGCGGAGGAG ATCTTCTTTG ATCGGCCGCT GACCTTCGCG GCGCTGGAGG CCGACATCTG GGCCGGCCTG CGTCCGGATC ATCGGGCTGC GGCCGACGCC GCCTGGCGTG AGCATCTGGG CAGCGGCCAG CCGTTCCGCT TTGAAGCCCC GACCAATCGC GCGGACGGCA AGTGCGTCTG GGCCCTCGTC ACGGGCGAAC TGGTCATGGA CGAGCAGGGA CGGCGGCTGC GTCTGGTCGG CGCGTTGCAG GACATCACGG CGCGGCGACT GGCTCAGGAG GCTGTCAGCA CGGCCGCCGC CGCCGCTCAG GCCGCCAATC GGGCCAAGTC CGAGTTCCTG GCGACGATGA GCCACGAAAT CCGCACGCCG CTCAACGGCG TTCTGGGCAT GGCCCAAGCC ATGGAACTGG ATCCGCTGCC GCCGGTCCAG CGCGACAGGT TGTCGGTCAT CCGGGAATCT GGCCAGGCCC TGTTGGCGAT CCTCGACGAT GTCCTGGACC TGTCCAAGAT CGAGGCGGGC AAGCTGGAAC TCGAGGAAGC CGAGTTTGAG TTGGCGGAGG TGGCGCGCCG GGCGCAGGCG GCCTTCGCGG CGCTAGCCGC CAAGAAGGGG GTTCGCCTGA CTTTGGACGT TCGCCAGGCT CAGGGGGCCT ATGTCGGCGA CCCCATTCGG GTGCTGCAGA TTCTCTACAA CCTGATTTCC AACGGCCTGA AATTCACGGA GGCGGGCGAG GTTCAGGTCA CCGCGCGGCA TCGTCACGGG GCCTTGGTTC TTGCCGTCAG CGATACGGGC ATCGGCATGA CCCCCGCCGT CGTGGAGACC CTTTTCACCC CGTTCGTTCA GGCCGACACC TCCACCACGC GGCGCTTTGG CGGTACAGGC CTGGGGCTGT CGATCACCCG CAGCCTGGTG GAAAAAATGA GCGGGTCGAT CCAGGTGGAA AGCACGCCCG GCAGGGGGTC CCGTTTCGTG GTAACCCTGC CTCTGCCTCG GGCGGAGCCC TCAAGAGAAA GAACAGATCG ACCACGCCTC GCGCCGGCGA GCACGGCCCG GTCGTTGGCC AGCCTTCGGG TGCTGGCGGC CGAGGACAAT CCGACCAACC AGTTGGTGAT CAAGACCTTG CTGAGCCAGA TCGGTATCGA GCCGGTGTTC GTCGACAATG GCCGCGACGC GGTGAGCGCC TGGGAGGAGG GCGCTTTCGA TATGATCTTG ATGGACGTGC GCATGCCTGA ACTCGACGGG CCGGACGCCA CCCTCGCCAT TCGAGCGCGG GAAGCGGTCC TTGGCAGACC CCGCACGCCG ATCATTGGCT TGACCGCCAA CGCCATGCCC GACCAGATTC TGAGCTACCA GCAGGCTGGA ATGGACACGG TCGTCACCAA GCCGATCGAC GTCGCTAGCC TGTTCGAGGC CCTCGCGGTC TTCACTCAGG CGGGCGACAG CTAG
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Protein sequence | MSVPSAIATQ DLLDGILKIS SEAIIVTDER GVVLMFSVGA ETIFGYRAAE MIGASIERLI PPEARAHHRD HVAAFGKGPV DTVVMRERGT IQGLRKDGAR FALEASLSRS MTREGMVFTT LIRDVSAREA GQAAVAASER RLRIALQNAR MHVIEIDYQA QVLSKAGAEE IFFDRPLTFA ALEADIWAGL RPDHRAAADA AWREHLGSGQ PFRFEAPTNR ADGKCVWALV TGELVMDEQG RRLRLVGALQ DITARRLAQE AVSTAAAAAQ AANRAKSEFL ATMSHEIRTP LNGVLGMAQA MELDPLPPVQ RDRLSVIRES GQALLAILDD VLDLSKIEAG KLELEEAEFE LAEVARRAQA AFAALAAKKG VRLTLDVRQA QGAYVGDPIR VLQILYNLIS NGLKFTEAGE VQVTARHRHG ALVLAVSDTG IGMTPAVVET LFTPFVQADT STTRRFGGTG LGLSITRSLV EKMSGSIQVE STPGRGSRFV VTLPLPRAEP SRERTDRPRL APASTARSLA SLRVLAAEDN PTNQLVIKTL LSQIGIEPVF VDNGRDAVSA WEEGAFDMIL MDVRMPELDG PDATLAIRAR EAVLGRPRTP IIGLTANAMP DQILSYQQAG MDTVVTKPID VASLFEALAV FTQAGDS
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