Gene Caul_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2964 
Symbol 
ID5900419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3219398 
End bp3221341 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content66% 
IMG OID641563461 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001684589 
Protein GI167646926 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.443547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGTCC CCTCCGCGAT AGCGACGCAA GATCTTCTCG ACGGCATTCT AAAAATCTCG 
TCCGAAGCCA TCATCGTCAC CGACGAACGT GGCGTGGTTT TGATGTTCAG CGTTGGGGCC
GAGACGATCT TCGGCTATCG GGCCGCGGAG ATGATCGGCG CGTCGATAGA GCGCTTGATC
CCGCCCGAGG CGCGCGCGCA TCACCGCGAC CATGTCGCGG CGTTCGGCAA GGGGCCGGTC
GACACCGTGG TCATGCGTGA GCGCGGCACG ATTCAGGGAC TTCGAAAGGA TGGCGCCCGG
TTTGCCCTGG AAGCTTCTCT GTCGCGGTCG ATGACCCGTG AGGGCATGGT GTTCACCACC
CTGATCCGAG ACGTCAGCGC AAGGGAGGCC GGACAGGCGG CGGTGGCCGC CTCGGAGCGG
CGCTTGCGCA TCGCGCTGCA AAACGCGCGC ATGCACGTCA TCGAGATCGA CTACCAGGCC
CAGGTGCTGT CCAAGGCTGG AGCGGAGGAG ATCTTCTTTG ATCGGCCGCT GACCTTCGCG
GCGCTGGAGG CCGACATCTG GGCCGGCCTG CGTCCGGATC ATCGGGCTGC GGCCGACGCC
GCCTGGCGTG AGCATCTGGG CAGCGGCCAG CCGTTCCGCT TTGAAGCCCC GACCAATCGC
GCGGACGGCA AGTGCGTCTG GGCCCTCGTC ACGGGCGAAC TGGTCATGGA CGAGCAGGGA
CGGCGGCTGC GTCTGGTCGG CGCGTTGCAG GACATCACGG CGCGGCGACT GGCTCAGGAG
GCTGTCAGCA CGGCCGCCGC CGCCGCTCAG GCCGCCAATC GGGCCAAGTC CGAGTTCCTG
GCGACGATGA GCCACGAAAT CCGCACGCCG CTCAACGGCG TTCTGGGCAT GGCCCAAGCC
ATGGAACTGG ATCCGCTGCC GCCGGTCCAG CGCGACAGGT TGTCGGTCAT CCGGGAATCT
GGCCAGGCCC TGTTGGCGAT CCTCGACGAT GTCCTGGACC TGTCCAAGAT CGAGGCGGGC
AAGCTGGAAC TCGAGGAAGC CGAGTTTGAG TTGGCGGAGG TGGCGCGCCG GGCGCAGGCG
GCCTTCGCGG CGCTAGCCGC CAAGAAGGGG GTTCGCCTGA CTTTGGACGT TCGCCAGGCT
CAGGGGGCCT ATGTCGGCGA CCCCATTCGG GTGCTGCAGA TTCTCTACAA CCTGATTTCC
AACGGCCTGA AATTCACGGA GGCGGGCGAG GTTCAGGTCA CCGCGCGGCA TCGTCACGGG
GCCTTGGTTC TTGCCGTCAG CGATACGGGC ATCGGCATGA CCCCCGCCGT CGTGGAGACC
CTTTTCACCC CGTTCGTTCA GGCCGACACC TCCACCACGC GGCGCTTTGG CGGTACAGGC
CTGGGGCTGT CGATCACCCG CAGCCTGGTG GAAAAAATGA GCGGGTCGAT CCAGGTGGAA
AGCACGCCCG GCAGGGGGTC CCGTTTCGTG GTAACCCTGC CTCTGCCTCG GGCGGAGCCC
TCAAGAGAAA GAACAGATCG ACCACGCCTC GCGCCGGCGA GCACGGCCCG GTCGTTGGCC
AGCCTTCGGG TGCTGGCGGC CGAGGACAAT CCGACCAACC AGTTGGTGAT CAAGACCTTG
CTGAGCCAGA TCGGTATCGA GCCGGTGTTC GTCGACAATG GCCGCGACGC GGTGAGCGCC
TGGGAGGAGG GCGCTTTCGA TATGATCTTG ATGGACGTGC GCATGCCTGA ACTCGACGGG
CCGGACGCCA CCCTCGCCAT TCGAGCGCGG GAAGCGGTCC TTGGCAGACC CCGCACGCCG
ATCATTGGCT TGACCGCCAA CGCCATGCCC GACCAGATTC TGAGCTACCA GCAGGCTGGA
ATGGACACGG TCGTCACCAA GCCGATCGAC GTCGCTAGCC TGTTCGAGGC CCTCGCGGTC
TTCACTCAGG CGGGCGACAG CTAG
 
Protein sequence
MSVPSAIATQ DLLDGILKIS SEAIIVTDER GVVLMFSVGA ETIFGYRAAE MIGASIERLI 
PPEARAHHRD HVAAFGKGPV DTVVMRERGT IQGLRKDGAR FALEASLSRS MTREGMVFTT
LIRDVSAREA GQAAVAASER RLRIALQNAR MHVIEIDYQA QVLSKAGAEE IFFDRPLTFA
ALEADIWAGL RPDHRAAADA AWREHLGSGQ PFRFEAPTNR ADGKCVWALV TGELVMDEQG
RRLRLVGALQ DITARRLAQE AVSTAAAAAQ AANRAKSEFL ATMSHEIRTP LNGVLGMAQA
MELDPLPPVQ RDRLSVIRES GQALLAILDD VLDLSKIEAG KLELEEAEFE LAEVARRAQA
AFAALAAKKG VRLTLDVRQA QGAYVGDPIR VLQILYNLIS NGLKFTEAGE VQVTARHRHG
ALVLAVSDTG IGMTPAVVET LFTPFVQADT STTRRFGGTG LGLSITRSLV EKMSGSIQVE
STPGRGSRFV VTLPLPRAEP SRERTDRPRL APASTARSLA SLRVLAAEDN PTNQLVIKTL
LSQIGIEPVF VDNGRDAVSA WEEGAFDMIL MDVRMPELDG PDATLAIRAR EAVLGRPRTP
IIGLTANAMP DQILSYQQAG MDTVVTKPID VASLFEALAV FTQAGDS