| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2947 |
|---|
| Symbol | |
|---|
| ID | 5900402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3196644 |
|---|
| End bp | 3198839 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641563444 |
|---|
| Product | molydopterin dinucleotide-binding region |
|---|
| Protein accession | YP_001684572 |
|---|
| Protein GI | 167646909 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.975721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCGC CGACCAGCAT GGTGCGCACT GGCGTCTGTC CTCTTTGCGA AGCGATGTGC
GGCCTGGAAA TGACCGTCGA CGGCGACCGC GTGGTCGGCG TGCGGGGCGA CGCCAGCGAC
CCCTTGAGCG CCGGCTTCCT GTGCCCCAAG GCCGTCGCCC TGGAGGACCT GTCGGCTGAT
CCGCGCCGCA TCGATCAACC CATGCTGCGG ACCGGCGACC AGCGCCGGCC GATCCCCTGG
GACGAGGCCC TGGACCTGGC CGGGACCAGG CTGGGCGACC TCCAGCGCCG ACATGGCGTC
GACGCGGTGG CCTTCTACAG CGGCAATCCC AACCTTCACT CCTACGCCGC CCAGTTGTCG
GAACTGACCT TCAAGCGCGC CCTGCGCAGC CGCAACTGCA GCTCCACCGC CTCGGTCGAT
CACCTGCCGC ACATGGTGGC CGCCGCGGCG ATGTTCGGCC ACCCGCTGCT GCTGCCCGTG
CCGGACCTCG ACCGCACTGA CTTCTTCCTG GTCCTGGGCG CCAATCCCGC CGACTCCAAC
GGCAGCCTGA TGGGCGCGCC AGGCATGCCG CTTCGGCTGC ACAAGCTGCG CCAGCGCGGG
ACCCGGGTGG TGGTGGTCGA TCCCTGCCGT ACCCGCACCG CCGACCTGGC CGACACCCAC
CTGTTCATCC GCCCGGGCAC GGACGCCCTG CTGCTGCTGG CCCTGGTCCG CATCCTGTTG
ACCGAAAACC TGGTCAGGCT TGGGCGGCTG TCCGGCCTGG TCGACGCCGT CGAGGCCCTG
CGCCAGGCCA GCGCGCCGTT CTCGCCGGAC CGCATCGCGC CGGTCACCGG CCTGGATCCT
CGCGCCGTCG TCGATCTGGC GCGAGACCTC GCCGCCGCGC CGACGTCGGT CGTCTATGGC
CGCGTCGGGG TCTGCACCCA GGAGCACGGC GCGCTCTGCG CCTGGTTGAT CAACGTCCTG
AACATCCTGA CCGGCAATCT CGACCGCCCC GGCGGCGCGA TGTTCCCCAC CCCGGCCGTC
GATATCGTCG CCGCCGCCTC GATGCTGGGC GCGGCCGGTG GGATGGAGCC CGGGCGCAGC
CGGGTGCGCG GTCTGCCCGG CTTCAACGGC GAGCTGCCGC TCTCGACCCT GGCCGAGGAG
ATCGACACCC CGGGCGAGGG CCAGGTGCGG GGCCTGATCG TCTCGGCCGG CAATCCGGTG
CTGTCCGGCC CCAACGGCCG ACGACTGGAA GCGGCCCTGC CACGTCTCGA CTTCATGGTC
GCCATCGATC GCTATGTGAC CGAGACCACT CGCCATGCCG ACCTCATCCT GCCGGCCGCC
ATGCCGCTGG AGCGCGACCA CTACGACGTG GTGTTCCGGG CCTTCGGCGT GCGCGACACC
GCTCGCTTCC AGGAAGCGAT CCTGCCCCGG CCGCCCGGCG TACGGGAGGA CTGGCGGATC
TATTGCGGCC TAGGCGAGCG GATCGCCCGC CGGCGGGGTC TGGAAGGTCA CCTTTCGGCC
CTGTCGCTGT CGGCCCTGCA GGCCGTCACC CCGCGCCGCA TCCTCGATCT GCTGCTGCGC
CTGGGTCCCC ACGGCCTGAG CCTGAACCAG CTGGCGCGGA GCCCTCACGC CGTGGATCTC
GGCCCGCTGC GCCCCGCCCT GCCCGCGCGG CTGCGCACGC CCGACAAGCG GATTCAGCTC
ACGCCGCCAG TCCTGCTCGA AGCCCTTCCG GGCCTGGCCG CGCGCCTGGA CATGCCGCAA
CCGCCCAGCG ACGCCTTGGT GCTGATCGGC CGCCGGCAGC TGCGCAGCAA CAACAGCTGG
ATGCACCACC TGCCTCGCCT GCAGCGGGGC AGCAATCGCT GCACCCTGCT GATCCATGAG
ACCGACGCCC GCCGCCGGGG CCTGGCCCCT GGTCAGACGG TCGAGATCCG CGGCCGTACC
GGCGCCGTCG AGGCGCCGGT CGAGATCACC AACAGGATCA TGCCCGGCGT CGTCAGCCTG
CCGCACGGCT TTGGCCACGG ACGCATAGCC GCCGAGCGAG CGATCCCGCG GGATTGGATC
GGCGCCAGCC TCAACGACCT TACTGACGAC ACGCGTCTGG ACCGCCAGTC CGGCGCGGCC
GCTTTCAGCG GCGTGCCGGT CGAGGTCGCC GCCGTTCCTC GCGAACTCGC CGAAGCGAGC
TCGTCCATGC TCCACCCCGC GCCCAGTCAA ACCTAG
|
|---|
| Protein sequence | MSPPTSMVRT GVCPLCEAMC GLEMTVDGDR VVGVRGDASD PLSAGFLCPK AVALEDLSAD
PRRIDQPMLR TGDQRRPIPW DEALDLAGTR LGDLQRRHGV DAVAFYSGNP NLHSYAAQLS
ELTFKRALRS RNCSSTASVD HLPHMVAAAA MFGHPLLLPV PDLDRTDFFL VLGANPADSN
GSLMGAPGMP LRLHKLRQRG TRVVVVDPCR TRTADLADTH LFIRPGTDAL LLLALVRILL
TENLVRLGRL SGLVDAVEAL RQASAPFSPD RIAPVTGLDP RAVVDLARDL AAAPTSVVYG
RVGVCTQEHG ALCAWLINVL NILTGNLDRP GGAMFPTPAV DIVAAASMLG AAGGMEPGRS
RVRGLPGFNG ELPLSTLAEE IDTPGEGQVR GLIVSAGNPV LSGPNGRRLE AALPRLDFMV
AIDRYVTETT RHADLILPAA MPLERDHYDV VFRAFGVRDT ARFQEAILPR PPGVREDWRI
YCGLGERIAR RRGLEGHLSA LSLSALQAVT PRRILDLLLR LGPHGLSLNQ LARSPHAVDL
GPLRPALPAR LRTPDKRIQL TPPVLLEALP GLAARLDMPQ PPSDALVLIG RRQLRSNNSW
MHHLPRLQRG SNRCTLLIHE TDARRRGLAP GQTVEIRGRT GAVEAPVEIT NRIMPGVVSL
PHGFGHGRIA AERAIPRDWI GASLNDLTDD TRLDRQSGAA AFSGVPVEVA AVPRELAEAS
SSMLHPAPSQ T
|
|---|
| |