Gene Caul_2926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2926 
Symbol 
ID5900381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3172386 
End bp3173552 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content69% 
IMG OID641563423 
Productcystathionine beta-lyase 
Protein accessionYP_001684551 
Protein GI167646888 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01324] cystathionine beta-lyase, bacterial 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.871498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGG ATGAAGAAAC CCGCCTGGTC CGCAGCGGCG CCCCGCCCAA GGGCGGTTCG 
GTGTTGGCCC GCACGGTCAA TCCGCCGATC CAGCGCGGCT CGACGGTGCT GCTGCCCAAC
GCCGCCTCGC TGTACGACGA TAACCAGCTA ACCTACGGCA TCACCGGCCT CTCCTCCCCC
GCCAACCTGC AGCTGGCCCT GGCCGAGCTG GAGGGCTCGC CCGACGTGAC GCTGTATCCG
TCGGGCCTGG CGGCGATCAC CGGGGTGATG CTGGCCCTGC TGAAGGCCGG CGACGAGATC
CTGGTGGTCG ATAGCGCCTA CAAGCCCACG CGCCGGTTCT GCGACCGGGT GCTGACCCGC
TTTGGCGTCA AGACGACCTA CTACGACCCA GCCTTGTCGC CCGACGCCCT GATGGCCCTG
TGCACGCCGC GCACCCGGAT GATCCTGCTG GAAGCCCCCG GCTCGCTGAC CTTCGAGATG
CAGGACATCC CGGCCATCGC CGCCGCCGCC AACGCGCGCG ACGTCCTGAC CCTGATCGAC
AACACCTGGG CGGCCAGCTT CTATTTCAAG CCCCTGGCCC ACGGGGTGAC CATCAGCGTC
CAGGCCCTGA CCAAATATGT CGGCGGCCAC TCCGACGTGT TCATGGGCAG CGCCGCCACC
GCCGATAACG TGATCGGCAA CCAGTTGGGC GACGCGATGT GGGACATCGG CTGGTCGGTG
TCGCCCGACG ACGCCTATAC CGTGCTGCGC GGCCTGCGCA CCCTGGCCAC GCGCCTGCCG
GTCCATCAGG CCAACGGCCT GACGATCGCC CGCTGGCTGC AAGGCCGGCC GGAGGTGGCC
CGCGTGCTGC ACCCGGCCCT GGAGGGCGAT CCGGGCCACG CCCTGTGGAA GCGCGACTTC
ACCGGCGCCT GCGGCCTGTT CGGCGTGGTG CTCAGGCCCG CCCGCGAAAA GGCCGTCCAC
GCCTTCCTCG ACGCGCTGGA GCTATTTGGC CTGGGCTTCT CGTGGGGCGG CTATGAGAGC
CTGGCCATCC ACTGCGATCC GCAACTGAAG AACCGCTCGG TTCCCGTGAA CCTGGAAGGT
CCGCTGCTGC GCCTGCACAT TGGCTTGGAG TCCCCCGCCG ACCTGATCGC CGACCTGGAA
CGCGGCTTCG CGGCCTTGAA CGCCTGA
 
Protein sequence
MPLDEETRLV RSGAPPKGGS VLARTVNPPI QRGSTVLLPN AASLYDDNQL TYGITGLSSP 
ANLQLALAEL EGSPDVTLYP SGLAAITGVM LALLKAGDEI LVVDSAYKPT RRFCDRVLTR
FGVKTTYYDP ALSPDALMAL CTPRTRMILL EAPGSLTFEM QDIPAIAAAA NARDVLTLID
NTWAASFYFK PLAHGVTISV QALTKYVGGH SDVFMGSAAT ADNVIGNQLG DAMWDIGWSV
SPDDAYTVLR GLRTLATRLP VHQANGLTIA RWLQGRPEVA RVLHPALEGD PGHALWKRDF
TGACGLFGVV LRPAREKAVH AFLDALELFG LGFSWGGYES LAIHCDPQLK NRSVPVNLEG
PLLRLHIGLE SPADLIADLE RGFAALNA