| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2859 |
|---|
| Symbol | |
|---|
| ID | 5900314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3102719 |
|---|
| End bp | 3105427 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641563356 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001684484 |
|---|
| Protein GI | 167646821 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.115194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0892472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTATCA CCTTGAACAA CAGATCGCGT CTGGCGCTGT CCGGCGCGTC GTTTCTAGCC
TTGGCGCTGT TGGCCTCGGG GCCGGCCTGG GCCCAAACGT CGGACACGGC CGGATCGAGC
GAAGCGCCCA GGCAGCGGTC GGACGCCGAT CGCGCCGCGT CGAGCGTTCC GGAGCAGGTC
TCCGAAGTCG TCGTGACCGG ATCGAGTATC CGCGGCGTCC CGCCAACGGG CTCGAACCTG
ATCAGCGTCT CGCGTGAAGA CATCAGGACC ATCGGCGCGA ACACCACGCC GGACTTGCTG
GCCAGCGTGC CGCAGTTGAA CAGCTTCAAC ACCGCGCCGC GGGCCGCCAA TGGCGGGGCT
GGCGCGTTCG CGCCCGGCCT GCGCAGCCTG CCGGCCAGCG CGACGCTGCC GCTCATGAAC
GGCCACCGCT TGGTGGCTGG GGGCACGAAC CAGACTAATC CTGACTTCCC GTTCCTTCCC
GAACTCGCGA TCGAGCGCGT CGAGATCGTC GCGGACGGCG CCTCGGCGAT CTATGGTTCG
GACGCGGTCG CGGGCGTGGT CAACTTCATC ACCCGGCAGC GCTATTCAGG CGTCGATACG
TCCATCCGCT ACGGGACGGC CGACGACTAT CATACGTTCA GCGCGAGCGG CCTGGTTGGC
CGCAGCTGGG ATCGCGGATC CGTCGTGGCC GCCTACCAGT ATGCGGAGAA CGGCGACATC
CTGGGGGGCG ACCGCGACTA CCGGATCGTC GACCTGCGTC CCTATGGCGG CGTCGACACG
CGCACGACGG TTTGCCCGTC GCCCAACGTG CTGGTCAACA CCACGGCCTA CGCCGTCAAC
TACGCTGCGC CCGCCCTGGC TCCGAACACC ACGAACTCTT GCGACAACGG GGCTGTGACC
TCCTTGGTCC CCAAATCGCG CCTGCACAGC GGGTATCTCA CGGCCCGGCA GGACCTGAGC
GACCGCGTCA CCCTGTGGGG CGAGCTTCTC TATTCGGATC GCAAGGACAC GGTTCAGGCG
CCGCCGCCGC CCGGAGCCGG CGCGTCGGGC GGGGTGATCC TGTACAACCT CCCCGGCTTC
GCCAACCCCT TCTTCAAGAC GCCGCCGGGC TCCGGCGCCA CGACGGAGTT CGTCCAGTTC
CGCACCGACA ACCTTTATGG CGCGGACCAT ATAAATAACG TCTTCCGCGT GCGTGCAGGC
AACTCGTCGG CGGGCCTAGA CGCCAAGCTC CCTCGCGACC TGAAGCTGAC GGTCTCGGGG
ACCTATGATT GGGCCACGAA CGACACCTAC CTTCCCGCGA TCAACCCGGC CGCGCTCGAC
GCGGCGGCGC TGGGAACCAC GACGGCCACG GCGCTCGATC CGTTCGGCAA TGGCACGTCA
CCCGCGGTCG CGGCCAAGAT CACCGACTAC GCCGGCGACC TTGTCATCCA CCAGCGCACC
TATCTGGGCG CGGCCAAGAT CGACGGGCCG CTGGCCGACC TGCCGGGCGG GCAGCTGAAG
GTCGCGGTCG GCGCCGAGTA TCGGCACGAG ACCTTCCAGC AGCGGGGCAT CTACGGCGGG
TCCCAGGTGC CCGAAGACCT GACCCGCAAC ATCGGGTCGA TCTACGGCGA GCTGTTCGTG
CCCATTGTCG GCGACGGCAA CCCGGCGCCG TTGATCCGCA GCCTGGCCCT GTCGCTCTCC
GGTCGCTACG ACCACTACAG CGACTTCGGA TCGACGACGA ACCCGAAGGT CGGGGTCAAC
TGGGATCCAG TGCGCGGCCT GACGCTTCGC GGCACCTACG GCCGCTCGTT CCGGGCGCCG
GGCCTGCGCG ACGTCGGAGC CACCGTCGGC GCCTACTATT ACAACGCCGC AGCCATCGCC
GGCAGCACCT TCCGCGATCC CACGCGGGGC GCCGCCCAGG TCGACACCAT TTTCCTGCTC
GGGGGCAACC GCAACCTCCA GCCGGAAGAG GCCCGAACCT ATTCGATCGG CGCCGACCTA
CACCCGGACT TCCTGCCCAA CTTCCATGGC AGCGTGACGT TCTACGATAT CCGATACACC
AACGTGATCG GAACGCCCGG CGGCGCCATC GCCTTCACCG ATCCCACCTT CTCCTCGGTG
ATCTATCGCA ACCCCACCGC GGCGCAGCTC AACAGCCTGC TGGGGATCGC GGTGCCGGTC
AACTTCGTGC CGGGGGCCTT GCCAACGATC GGAAACTTGC TCGATTTCCG GCAGGGCAAT
TTCGGCGTCC GCAAGACCAA CGGCCTGGAT TTCGACCTCG GCTATCGCCA GCCGACGAGC
TTCGGCGCGC TGTATGCCGG CCTGGCCGGC AACTACATCT TCAAGTTCGA AACCCAGCTC
TCGCCGACCG CGCCGGTCTC CGACAGCCTG AAGCTCGGCA TACCCACGAC GACCCTGAGA
GGAACGCTCG GCGCCCAGGC AGGCCTCTTC AACGCGGTGG CGTTCGTCAA CTATCGCGGC
GGCGTGACAG GTCTGTACGC CACGCCCACC AGCGCCGCCG AATATAGCGC CAAGGCCTAT
ACGACCGTCG ATCTGCGCTT CTCGGTGAAG CTGCCCTACG GCGGTCTGGC CAAGAGGACC
GAGCTGGGCC TGCAGGTGAA CGACCTGTTC GATAAGGATC CGCCCTTCTT CCCGCAGGCC
GAAGGAATCG GCGGCGCCTA CAACCCGATC GGCCGCTACT TGGCGCTGAA CCTTCGGAAG
AGCTTTTGA
|
|---|
| Protein sequence | MSITLNNRSR LALSGASFLA LALLASGPAW AQTSDTAGSS EAPRQRSDAD RAASSVPEQV
SEVVVTGSSI RGVPPTGSNL ISVSREDIRT IGANTTPDLL ASVPQLNSFN TAPRAANGGA
GAFAPGLRSL PASATLPLMN GHRLVAGGTN QTNPDFPFLP ELAIERVEIV ADGASAIYGS
DAVAGVVNFI TRQRYSGVDT SIRYGTADDY HTFSASGLVG RSWDRGSVVA AYQYAENGDI
LGGDRDYRIV DLRPYGGVDT RTTVCPSPNV LVNTTAYAVN YAAPALAPNT TNSCDNGAVT
SLVPKSRLHS GYLTARQDLS DRVTLWGELL YSDRKDTVQA PPPPGAGASG GVILYNLPGF
ANPFFKTPPG SGATTEFVQF RTDNLYGADH INNVFRVRAG NSSAGLDAKL PRDLKLTVSG
TYDWATNDTY LPAINPAALD AAALGTTTAT ALDPFGNGTS PAVAAKITDY AGDLVIHQRT
YLGAAKIDGP LADLPGGQLK VAVGAEYRHE TFQQRGIYGG SQVPEDLTRN IGSIYGELFV
PIVGDGNPAP LIRSLALSLS GRYDHYSDFG STTNPKVGVN WDPVRGLTLR GTYGRSFRAP
GLRDVGATVG AYYYNAAAIA GSTFRDPTRG AAQVDTIFLL GGNRNLQPEE ARTYSIGADL
HPDFLPNFHG SVTFYDIRYT NVIGTPGGAI AFTDPTFSSV IYRNPTAAQL NSLLGIAVPV
NFVPGALPTI GNLLDFRQGN FGVRKTNGLD FDLGYRQPTS FGALYAGLAG NYIFKFETQL
SPTAPVSDSL KLGIPTTTLR GTLGAQAGLF NAVAFVNYRG GVTGLYATPT SAAEYSAKAY
TTVDLRFSVK LPYGGLAKRT ELGLQVNDLF DKDPPFFPQA EGIGGAYNPI GRYLALNLRK
SF
|
|---|
| |