| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2847 |
|---|
| Symbol | |
|---|
| ID | 5900302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 3087273 |
|---|
| End bp | 3087959 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641563343 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001684472 |
|---|
| Protein GI | 167646809 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0250663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC GTTCACTGAT GGCGCGCTCC ATGATGGCGA GGGGCTTGTC TGCGTCGATC
CCGATGACGG GCGACATGCA TGAAGGCCCG CCCCTGGTGG CCTTCGACTT CGATGGCACC
CTGACGGTTC GCGACAGTTT CACCGCCTTC CTGAAGTGGC GGGTCAGCCC GGCGCGGCAT
TTCATCGGCA TGGTGCGCCT GTTTCCCGCC GCCGTCCGGT ATGTGTTCGA CCGCAATCGG
GGCCGGATCA AGGCCGCCGC CGTTCGCGAA TTCCTGCGCG GGGTCAGCCT GGAGGACCTG
GAGCGCGAAG CCCGCGCCTT CGCCCAGTCC GAAGCCCTTC GCCTGTTCCG CCCCGACGCC
CTGGCCGTTT GGCGGCGCTG GCGGGCCAAG GGGGCCAAGC TGGTGATTGT CACCGCCTCG
CCCGACGTGG TGGTGGCGCC GTTCGCCCGC GGCCTGGGCG CCGACCTGCT GATCGGCTCG
CGTCTGGCCC TTGATCCCAA CGACATGGTG CTCGGCCCCC TGCTCGGCCC CAACTGCCGA
GGGGCGGAGA AGGTGACGCG ACTGCGTGAG GTTTTCGGCG ACGATATGTC GCTGGCCGCC
GCCTATGGCG ACACTGCCGG AGACCGCGAG ATGCTGGCGA TCGCCCATGA GAAGGGCTAC
CGGATCTTCC GAGGCAGACC AGGCTGA
|
|---|
| Protein sequence | MAKRSLMARS MMARGLSASI PMTGDMHEGP PLVAFDFDGT LTVRDSFTAF LKWRVSPARH
FIGMVRLFPA AVRYVFDRNR GRIKAAAVRE FLRGVSLEDL EREARAFAQS EALRLFRPDA
LAVWRRWRAK GAKLVIVTAS PDVVVAPFAR GLGADLLIGS RLALDPNDMV LGPLLGPNCR
GAEKVTRLRE VFGDDMSLAA AYGDTAGDRE MLAIAHEKGY RIFRGRPG
|
|---|
| |