Gene Caul_2834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2834 
Symbol 
ID5900289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3074276 
End bp3074920 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID641563326 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_001684459 
Protein GI167646796 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.156781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.125217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG TTGTTTCCAC CGAGGCCCCC GCGCTTTCGC CGCTCGAGGC GCTGGGCCAG 
GCGATCGTCG CCAATTCGGC CGGCGCGATC ACCGCTTGGT CCGTGGCGTT CGGCGAGCTG
AATCTGCTGG GTCCGGCCAA CCGTATCGTC CAGGCGCTGA CCTATCTTCG CGACCACCCC
GACTACCGCT TCCACCAGCT GGTCGACCTG ACGGGCGTGG ACTATCCGGA GCGTGAGCGC
CGGTTCGACG TCGTCTATCA CCTGCTGTCG CTGATCAAGA ATCATCGCGT CCGGCTCAAG
GTGCAGACCG ATGAGGACAC CGCCGTCCCC AGCGTCACGC CGGTGTTCCC GGTCGCCGAC
TGGTTCGAGC GCGAAGCCTT CGACATGTAC GGGATCTTCT TCGACGGCCA CCCCGACCTG
CGCCGGATCC TGACCGACTA CGGCTTCCAC GGCCATCCGC TGCGGAAGGA CTTCCCGATG
ACGGGCTATG TCGAGGTTCG TTACGACGAC GAGCTGAAGC GCGTGGTCTA CGAGCCCGTG
AAGATCACCG AGTTCCGCGC GTTCGACTTC CTGTCTCCGT GGGAGGGCGC CAAGTACGCC
CTGCCGGGCG ACGAGAAGGC CGAGAAGCGG GCAGGGGACG CGTAA
 
Protein sequence
MTDVVSTEAP ALSPLEALGQ AIVANSAGAI TAWSVAFGEL NLLGPANRIV QALTYLRDHP 
DYRFHQLVDL TGVDYPERER RFDVVYHLLS LIKNHRVRLK VQTDEDTAVP SVTPVFPVAD
WFEREAFDMY GIFFDGHPDL RRILTDYGFH GHPLRKDFPM TGYVEVRYDD ELKRVVYEPV
KITEFRAFDF LSPWEGAKYA LPGDEKAEKR AGDA