Gene Caul_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2823 
Symbol 
ID5900278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3065732 
End bp3066343 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID641563315 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001684448 
Protein GI167646785 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.869313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0684756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGCGA TAGCTTTCTA TTTGCTCGCG GTAGCGACCG TGGTGGCGGG TCTTCTCGTC 
GTCTCGGCCA GGAACCCCGT GCACTCGGTG CTCTTCCTGA TCACCGCCTT CTTCTCGGCC
GCCGGCCTCT TCGTCCTGCT GGGCGCCGAG TTCCTGGCGA TGCTGCTGAT CGTCGTCTAT
GTGGGCGCGG TCGCGGTGTT GTTCCTGTTC GTGGTGATGA TGCTCGACGT CGACTTCACC
GAGCTGCGAC AGGGCTTCGC CCAGTATCTG CCGATCGGCG GTCTCGTGGC CGGCTTCCTG
ACGCTGGAGA TGATCTTCAT CGCCGCGACG GTGGCCACCA ACGGCAAGGC CGGTCTGAAC
GCTCTGCCGA ACGCGTCGCC GGGCGGCGTG CCGAACACAG AGGCGATCGG GCGGGTGCTC
TACACCGACT ACGTCTTCTT CTTCCAACTG GCGGGCCTGG TGCTGCTGGT GGCCATGATC
GGCGCCATCG TCCTGACCCT GCGCCACAAG GCGGGCGTCA AGCGCCAGGA CATCGGCAAG
CAGATCGCCC GTACGCCAAA GACCGGAATG GAAATCGTGC AGATCAAGCC GGGCGAGGGG
ATCAGCGAAT GA
 
Protein sequence
MQAIAFYLLA VATVVAGLLV VSARNPVHSV LFLITAFFSA AGLFVLLGAE FLAMLLIVVY 
VGAVAVLFLF VVMMLDVDFT ELRQGFAQYL PIGGLVAGFL TLEMIFIAAT VATNGKAGLN
ALPNASPGGV PNTEAIGRVL YTDYVFFFQL AGLVLLVAMI GAIVLTLRHK AGVKRQDIGK
QIARTPKTGM EIVQIKPGEG ISE