Gene Caul_2808 details

Gene Information

• Locus tag: Caul_2808
• Symbol: dnaE
• ID: 5900263
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Caulobacter sp. K31
• Kingdom: Bacteria
• Replicon accession: NC_010338
• Strand: -
• Start bp: 3047358
• End bp: 3050789
• Gene Length: 3432 bp
• Protein Length: 1143 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641563300
• Product: DNA polymerase III subunit alpha
• Protein accession: YP_001684433
• Protein GI: 167646770
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0587] DNA polymerase III, alpha subunit
• TIGRFAM ID: [TIGR00594] DNA-directed DNA polymerase III (polc)

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.30719
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.975511
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGGGCA GCGAAGGTCA GGGTTTCGTC CACCTTCGTG TCCGTTCGGC CTACTCGCTG 
CTGGAAGGCG CGATCAAGGC CGACAAGATC CCCGGCCTGG CCGCCGCGGC CGGCATGCCG 
GCGGCAGGAC TGGTCGATCG CAACAACCTG TTCGGCGCGC TCGAATATTC CGTCTATTCC 
AAGGACTATG GGGTCCAGCC GATCATCGGT TGCGCCCTGG CGGTTTCAGG CGTCGGCGCC 
GGACCGACCG AGCGCTGGGC GCGGACGCCG ACCATCACCC TGCTGGTTCA GAACGAGCGG 
GGCTATCTCA ACCTCTCCGA ACTGTCGTCC ATGGCCTATC TGGAAAGCGG CGAGATGGCC 
GAGCCGGTCG TGCCTTGGGC CAAGGTGGTC GAGCACGCCG AGGGGTTGAT CCTGCTGTCG 
GGCGGAACGG ACGGACCGGT CGACGCCCTG CTGGCCGCAG GCAAGACCGC CGAGGGCGAG 
GCGGCGCTGG TCGAGATGCA GCGGGCGTTC GGCGACCGCT TCTATGTCGA GCTGCAGCGC 
CATGGCCTGC CGCGCCAGGC CGCCGCCGAG CCGGGTCTGG TCCACTGGGC CTATGAGCAC 
GACGCGCCGC TGGTGGCCAC CAACGACGTC TACTACGCCA AGCCCGAGCT CTATGACGCC 
CACGACGCCC TGCTGTGCAT TTCCGACGGC GCTTTCGTCG GCCAGGACGA ACGACGGCGG 
GTGACGCCCG AGCACTGGTT CAAGTCGTCG GCCGACATGC GAAAGCTGTT CGCCGACCTG 
CCGGAAGCCT GCGACAACAC CCTGGATATC GCCCGCCGCT GCGCCTTCAT GGTGCAGAAG 
CGCGACCCGA TCCTGCCCAG TTTCCCGACC GGCGATGGCC GTAGCGAGCC CGAGGAACTG 
ACCCACCAGG CCAAGGAGGG CCTGCGAAAG CGCCTTGATG GCCTGGAACT GGCGGTCGAC 
GAGAAGGTCT ATTGGGACCG CCTCGACTTC GAGCTGTCGA TCATCATCAA GATGGGCTTT 
CCCGGCTATT TCCTGATCGT GTCGGACTTC ATCAAGTGGG CCAAGGAGCA CGGCATTCCC 
GTGGGGCCCG GGCGGGGTTC GGGCGCCGGG TCGCTGGTCG CCTGGGTGCT GACCATCACC 
GATCTGGACC CGCTGCGCTT TGGCCTGCTG TTCGAACGGT TCCTGAACCC CGAGCGGGTC 
TCCATGCCCG ACTTCGACAT CGACTTCTGC CAGGAGCGGC GGGAAGAGGT GATCGTCTAC 
GTGCAGGAGA AGTACGGCCG CGATCGCGTG GCCCAGATCA TCACCTTCGG CTCCCTGCAG 
GCGCGGGCCG TGCTGCGCGA CGTCGGCCGG GTGATGCAGC TGCCGCTGGG CCTGGTCGAC 
CGGCTCTGCA AGATGGTGCC CAACAATCCG GCCGCGCCGG TGACCCTGGC CCAGGCCATC 
GAGATCGAGC CGCGCCTCAA GCAAGCCCGT GATGAGGACG GTAACGTCAA GGCCTGCCTG 
GACGTCGCCT TGCAGTTGGA GGGCCTGTTC CGCAACGCCT CCACCCACGC CGCCGGCGTG 
GTCATCGGCG ACAGGCCCCT GACCCAGCTG ACGCCGCTCT ACAAGGATCC GCGCTCGGAT 
CTGCCGGCCA CCCAGTTCAA CATGAAGTGG GTCGAAAGCG CCGGCCTGGT GAAGTTCGAC 
TTCCTGGGCC TGAAGACCCT GACGGTGCTG GACCGGGCGG TGAAGCACCT GAAGAAGCGC 
GGCGAGATCA TCGACCTCAG CCGCCTGCCG TTCGACGACA CCAAGACCTA CGAGCTTCTA 
GCCTCGGGCC AAACGGTCGG CGTGTTCCAG CTGGAAAGCC AGGGCATGCG CGACACCCTG 
CGCAAGATGC GCTGCGGCTC GATCGAGGAG ATCACCGCGC TGATCTCGCT GTACCGCCCG 
GGGCCGATGG ACAACATCGA CACCTTCGTC GACTGCAAGT TCGATCGAAA GCCTGTCGAC 
TACCTGCACC CCTCGCTGGA GGTGGTGCTG AAGGAGACCT ACGGCGTCAT CGTCTACCAG 
GAACAGGTGA TGCAGATCGC CCAGATCCTG GCCGGCTACA GCCTGGGCGA AGCCGACCTG 
CTGCGCCGGG CCATGGGCAA GAAGAAGAAG GAGGAAATGG ATCTCCAGAA GATCCGTTTC 
GTCGCCGGCG CCAAGGAGAA GGACGTTCCC GAGGCGCAGT CGGGCTCGAT CTTCGAACTG 
GTGGCCAAGT TCGCCGGCTA CGGTTTCAAC AAGTCGCACG CCGCCGCCTA CGCCCTGATC 
GCCTACCAGA CGGCCTGGCT GAAGGCCAAT ACGCCGGTCG AGTTCCTGGC CGCCTCGATG 
AGCCTGGACC TGTCGAACAC CGACAAGCTG GCGGTCTTCC ACCAGGACGC CCGGCGGTTC 
GACATCGTCG TGCGTCCGCC GGACGTCAAT CGCTCGGGCG CCGATTTCGA GGTCGAGAAC 
GGCGAGGTGC TGTACGCGCT CGGCGCCGTG CGCAACGTCG GCCTCGAAGC CATGAAGCAC 
CTGGTGGCCA TCCGGGAGGA GGGCGGGCCT TTCCGCGATA TCTTCGATTT CGTCGAACGG 
GTGGATCCCA AGCTGGTCAA CAAGCGAGCG ATCGAGAACC TGGCCCGGGC CGGGGCCTTC 
GACTCCCTGT CCAAGAACCG CGCTCAGATC TTCGCCTCGG CCGACGTGTT GATCGCCCAT 
GGCCAGAGCA TCGCCGCCGA CCGCCAGGGC GGCCAGCACG CCCTGTTCGG CGGCGACCCG 
GCCGCCGGCC GTCCGCGCCT CAAGAAGACC GAGCCCTGGA GCCAGGTCGA CCTGCTCGAC 
GAGGAGCTGG CCGCGGTCGG CTTCTACCTG ACTGGCCACC CGCTGGACGA CATGGTCGGG 
GTGCTGCGCC GCCGGCGCAC CCACATGCTG ACCGAGGTCA TCCCGCGGGC CGAGGCTGGC 
ATGGAGGCTT TCCGGATGTG CGGCGTGGTC CGCCGCCGCC AAGAACGCGC CTCGCAGAGC 
GGCGAACGCT TCGCCTTCGT CTCGCTGTCG GATCCCAGCG GCGAATATGA GGTGCTGTTC 
CCGCCCGAGG CCCTGCGCAA GTGCCGCGAG GTGCTGGAGC CCGGCAAGGC GGTGGCGATC 
AAGGTCCGCG CCAAGGCCCG CGACGGCGAG GTGCGGTTTT TCGGCGACGA CGCCGAGCCG 
ATCGAGAAGG CCATCGAGAA CATGGTGGCC GGGTTGCGCA TGCACCTGTC GCCGTCGGCC 
ACCGAGATCG ACGCCTTGCG GCGCCGGCTG GAGGCGGCCG CTTCGCCGCG CGGCGGCGAG 
GTCAGTCTGA TCGCCGCCCT GGGCGGCGGT CGCGAGATCG AGATGAAGCT GCCCGGCCGC 
TACACCCTCG ACGCCGCCTT GCGCGGCGCC CTGAAGACCG CGCCCGGCGT GGCGCTGCTG 
GAAGACGTCT AG 

 

Protein sequence

MSGSEGQGFV HLRVRSAYSL LEGAIKADKI PGLAAAAGMP AAGLVDRNNL FGALEYSVYS 
KDYGVQPIIG CALAVSGVGA GPTERWARTP TITLLVQNER GYLNLSELSS MAYLESGEMA 
EPVVPWAKVV EHAEGLILLS GGTDGPVDAL LAAGKTAEGE AALVEMQRAF GDRFYVELQR 
HGLPRQAAAE PGLVHWAYEH DAPLVATNDV YYAKPELYDA HDALLCISDG AFVGQDERRR 
VTPEHWFKSS ADMRKLFADL PEACDNTLDI ARRCAFMVQK RDPILPSFPT GDGRSEPEEL 
THQAKEGLRK RLDGLELAVD EKVYWDRLDF ELSIIIKMGF PGYFLIVSDF IKWAKEHGIP 
VGPGRGSGAG SLVAWVLTIT DLDPLRFGLL FERFLNPERV SMPDFDIDFC QERREEVIVY 
VQEKYGRDRV AQIITFGSLQ ARAVLRDVGR VMQLPLGLVD RLCKMVPNNP AAPVTLAQAI 
EIEPRLKQAR DEDGNVKACL DVALQLEGLF RNASTHAAGV VIGDRPLTQL TPLYKDPRSD 
LPATQFNMKW VESAGLVKFD FLGLKTLTVL DRAVKHLKKR GEIIDLSRLP FDDTKTYELL 
ASGQTVGVFQ LESQGMRDTL RKMRCGSIEE ITALISLYRP GPMDNIDTFV DCKFDRKPVD 
YLHPSLEVVL KETYGVIVYQ EQVMQIAQIL AGYSLGEADL LRRAMGKKKK EEMDLQKIRF 
VAGAKEKDVP EAQSGSIFEL VAKFAGYGFN KSHAAAYALI AYQTAWLKAN TPVEFLAASM 
SLDLSNTDKL AVFHQDARRF DIVVRPPDVN RSGADFEVEN GEVLYALGAV RNVGLEAMKH 
LVAIREEGGP FRDIFDFVER VDPKLVNKRA IENLARAGAF DSLSKNRAQI FASADVLIAH 
GQSIAADRQG GQHALFGGDP AAGRPRLKKT EPWSQVDLLD EELAAVGFYL TGHPLDDMVG 
VLRRRRTHML TEVIPRAEAG MEAFRMCGVV RRRQERASQS GERFAFVSLS DPSGEYEVLF 
PPEALRKCRE VLEPGKAVAI KVRAKARDGE VRFFGDDAEP IEKAIENMVA GLRMHLSPSA 
TEIDALRRRL EAAASPRGGE VSLIAALGGG REIEMKLPGR YTLDAALRGA LKTAPGVALL 
EDV