Gene Caul_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2798 
Symbol 
ID5900253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3037941 
End bp3039425 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content67% 
IMG OID641563290 
Productmembrane-associated zinc metalloprotease 
Protein accessionYP_001684423 
Protein GI167646760 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000647763 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.117018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCT TCATCCAGTC CGCCGCGACC TACCTGATAG CGTTCCCGCT GGTGATCCTG 
CTTGTAGTGA CGATTCACGA GCTGGGACAC TTCTGGGCCG CCAAGGCCTG CGGCGTGGCG
ATTGACCGAT TCGCGATCGG CTTCGGCAAG CCGATCGCCA AGTGGCGTGA CAGGTCCGGC
GTTCAGTGGC AACTCGGCTG GCTGCCGCTC GGCGGCTATG TCCGCTTCTC GGGCGACGAG
AATGTCGCCA GCGTGCCTGA CCAGGACGAC CTTGAGGCCA TGCGCGCCGA GATCGAGCGC
CGCGAGGGCC GGGACGCGGT CGCCCGCTAT TTCCATTTCA AGCCGCTGTG GCAGCGGGCG
ATCATCGTCG TGGCCGGCCC GGTGGCCAAC TTCATTCTGG CCATCGCGCT GTTCGCCGTC
CTGGCCGGCG TGTTCGGCGA AGTCATCCGG CGGCCGATCG TCACCGGGGT GAACGCCGGC
AGTCCGGTCG CCGAAGCGGG CTTCCGGCAA GGCGACGTCG TCCTGTCGGT GGACGGCCGC
AAGCTGAAGG ACTTCAGCGA CCTCGACCAA TACGCGATGC TGCGTAGCGA CGTGCCGATC
CATTTCGAGG TCAAGCGCGG CGAACAGACG TTCGATCTCA CGGCCACGCC CGTCCTGCGC
GACGTCCCCG ATGGGTTGGG CGGAAGCCAG AAGGGCGGGG TCCTGGGCTT TGGCGTTCCG
GCGGTCATCG ACGAGGTCGT GCCCGGCGGA GCGGGCGACC GGGCCGGTTT CCGGCGGGGC
GACGTCGTGC AGCGCGCCGA CGGGATCGCG ATCAGCAGCT TCGAGGACCT CACGGCGTTC
GTGAAACGGC ACGGCGCCGC GCCGATCACC TTCGACGTCT ATCGCGGCGG GGAAACGATC
CGGCTGGTGG CGACGCCGGC CTTCGGCGAC GCGCCGACCG CCGCCGGAAA GACCGAACGC
CGACTCATGC TGGGCTTGAG CCGGATGATG CCCCGCCAGT ATATCGAACG GGTGCGCTAC
AACCCGATCC AGGCTCTAGG CGTGGGCGTC AAGCGCACCT GGGGCGTGCT CGACACCACG
GTCTACTATC TGGGGCGCAT GGTCCGCGGC GAGGTCTCGG CCGAACAGAT CGGCGGGCCG
CTGGGCATCG CCAAGACGTC GGGCCAGGTG GCCCAGATGG GCGCGGCGAG CGGCACGAAC
CTGCCCACCA TGCTGCTTGG CGCGGCGGTC GCTCTTTTCA GCCTGGCGGC GTTCCTTTCG
GTCAGCGTCG GCTTCATGAA CCTGTTGCCG ATCCCCGTTC TGGACGGCGG CCATCTGCTG
TTCTACGCCT ACGAAGCGGT CGCCCGGCGA CCGTTGGGGG CGCGGCTGCA AGCGGCCGGC
TATCGGGTTG GCCTTGCACT GTTGATGGGT TTCATGTTGT TCGCGACCTG GAATGATCTG
CAGCGCTTGA GCGTGTTTAA ATTCTTCGGC GGTCTGTTCT CTTGA
 
Protein sequence
MLGFIQSAAT YLIAFPLVIL LVVTIHELGH FWAAKACGVA IDRFAIGFGK PIAKWRDRSG 
VQWQLGWLPL GGYVRFSGDE NVASVPDQDD LEAMRAEIER REGRDAVARY FHFKPLWQRA
IIVVAGPVAN FILAIALFAV LAGVFGEVIR RPIVTGVNAG SPVAEAGFRQ GDVVLSVDGR
KLKDFSDLDQ YAMLRSDVPI HFEVKRGEQT FDLTATPVLR DVPDGLGGSQ KGGVLGFGVP
AVIDEVVPGG AGDRAGFRRG DVVQRADGIA ISSFEDLTAF VKRHGAAPIT FDVYRGGETI
RLVATPAFGD APTAAGKTER RLMLGLSRMM PRQYIERVRY NPIQALGVGV KRTWGVLDTT
VYYLGRMVRG EVSAEQIGGP LGIAKTSGQV AQMGAASGTN LPTMLLGAAV ALFSLAAFLS
VSVGFMNLLP IPVLDGGHLL FYAYEAVARR PLGARLQAAG YRVGLALLMG FMLFATWNDL
QRLSVFKFFG GLFS