| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2707 |
|---|
| Symbol | |
|---|
| ID | 5900162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 2939976 |
|---|
| End bp | 2941103 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641563199 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_001684332 |
|---|
| Protein GI | 167646669 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.497661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG GACCGCTGTC CGGCCTGAAG GTGCTGGAAT TCGCAGGGAT CGGCCCGGGG
CCGTTCTGCG GCATGCTGCT GTCGGACCTC GGGGCCGACG TGATCCGCAT CGACCGCAAG
GGCTCGGGGC GCAGCTCGCC GGCCGACGTC ACCGCGCGGG GGCGTCGCTC CGTGGCGCTG
GACCTGAAGT CGCCGGCCGC CGTCGAGACC TGTCTGAAGC TGATGGAGAG CGCCGATGGC
CTGATCGAGG GCTTTCGGCC CGGCGTCATG GAACGGCTGG GCCTGGGTCC AGACGTCGCC
CTGGCCCGCA ATCCCAAGCT GGTCTTCGGC CGGATGACCG GCTGGGGCCA GACAGGCCCC
TACGCCAAGG CCGCTGGTCA CGACATGAAC TACATCGCCA TCACCGGCGC CCTGGCCGCG
ATCGGCACCC AGGACAAGCC CGTGCCGCCG CTCAACCTGG TCGGCGATTT CGGCGGTGGG
GCGCTCTATC TGGCTTTCGG CCTGCTGGCC GGCGTGATCC ATGCCCGCGA GACAGGGCAA
GGCCAGGTGA TCGATTGCGC GATGAGCGAC GGCGCCGCCT CGCTGATGGC CATGTTCTAC
GGCTTCAAGG CCGGCGGAAT GTGGGGCGAG GGGCGGCGAT CCAACCTGCT CGACGGCGGC
GCGCACTTCT ACGACACCTA CCAATGCAGC GATGGGAAAT GGATCTCGAT CGGCTCGATC
GAGCCGCAGT TCTATCTGCT TCTGCTTGAA AAGACGGGGA TCACCGACCC TCAGTTCCAG
CATCAGATGA GCCGCGAGGA GTGGCCGCAG CTGCGGGAGA AGCTGGCGGC GGTGATCGCC
ACCAAGACCC GCGACGAGTG GTGCGCCCTG ATGGACGGCA CCGACGTCTG CTTCGCCCCG
GTCCTGACCA TGGACGAGGC CCCGGGCCAC GCCCACAACG CCGCCCGCCA GACCTTCGTC
GAGGTGGCCG GCGTCACCCA GCCGGCCCCG GCCCCCCGCT TTTCGGCCAC GCCCGGCGCG
ATCCAGGGGC CGCCGCCCAC GATCGGCGCC GACAACGACT CGGCCCTGGG CGACTGGGGC
TTCTCGGCGG GGGAGATCGC CGCGTTGAAG GAGCAGGGGG CTCTATAG
|
|---|
| Protein sequence | MAQGPLSGLK VLEFAGIGPG PFCGMLLSDL GADVIRIDRK GSGRSSPADV TARGRRSVAL
DLKSPAAVET CLKLMESADG LIEGFRPGVM ERLGLGPDVA LARNPKLVFG RMTGWGQTGP
YAKAAGHDMN YIAITGALAA IGTQDKPVPP LNLVGDFGGG ALYLAFGLLA GVIHARETGQ
GQVIDCAMSD GAASLMAMFY GFKAGGMWGE GRRSNLLDGG AHFYDTYQCS DGKWISIGSI
EPQFYLLLLE KTGITDPQFQ HQMSREEWPQ LREKLAAVIA TKTRDEWCAL MDGTDVCFAP
VLTMDEAPGH AHNAARQTFV EVAGVTQPAP APRFSATPGA IQGPPPTIGA DNDSALGDWG
FSAGEIAALK EQGAL
|
|---|
| |