| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2660 |
|---|
| Symbol | |
|---|
| ID | 5900115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2892161 |
|---|
| End bp | 2893111 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641563151 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001684285 |
|---|
| Protein GI | 167646622 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.384259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCC TCATCGTCGC CAGCCAACTT CCGGACCTGT TCAACAGCGT CTTCGCCCAG
CATGTCGGCG ACGCCGAGAT CATCGCCGTG CCGCCCGGCC TGCACGCACC TCTGCCGGAC
GACGCCAAGG TCCTGGTCGC CGCGCCGTTC CGCAAGGCCG GCGGCGTGCT GCCCGCCAAG
GCGCCGGCCG GTTGGCCCTA TGACGTCAAG TGGGTGCAGC TGGTCTCGGT CGGCATCGAC
TTCTACCCCG ACTGGCTGTT CGACGGCCCG GTCGTGACCT CGGCGCGCGG CTCCTCCTCC
GTGGCCCTCG CCGAGTTCGC CCTGGCCGCC ATCCTGGCCG AGGCCAAGCG CCTGCCCGAC
ATCTGGATCG ACAGGGCCGA GCGTTGGGCG CCGCAGCCGC TGAAGCTGAT TTCCGGCACG
ACCCTGGGTC TGGTCGGTTT CGGGGCGATC GGCGAGGCCC TGGCCCCGCG CGCCCAGGCC
CTGGGGCTGA ACGTCATCGC CACCCGCCGC TCCGACAAGC CGATCCCGAC CCCGGGCGTC
GAGCGCGTCG CCGACCTTGC GACCCTGTTC GCCCGCAGCG ACCACGTGGT GCTGGCCGCC
CCGGCCACTC CGGAGACCCA CCGCCTGATC GGCCGCGAGG TGTTGGCCGC CGCCAAGCCC
GGCCTGCACC TGATCAATAT CGCCCGCGGC GCCCTGATCG ACGACGAGGC TCTGCTGGAG
GCCCTGGACG ACGGCCGCGT CGCCCGCGCC AGCCTCGATG TCACCCATCC CGAGCCGCTG
CCAGAGGGGC ATTTCTTCTA CAACCATCCG AAGATCCGGC TGTCGCCTCA CACCTCGGTC
CACACCCCCG ACACCCGCCT CAACCTGGCG ACCCGCTTCG CCGAGAACCT CGCCCGTTTC
CGATCCGGCG CGCCCCTGGC CGACGTCGTC GACCTGTCGC GCGGCTACTG A
|
|---|
| Protein sequence | MSRLIVASQL PDLFNSVFAQ HVGDAEIIAV PPGLHAPLPD DAKVLVAAPF RKAGGVLPAK
APAGWPYDVK WVQLVSVGID FYPDWLFDGP VVTSARGSSS VALAEFALAA ILAEAKRLPD
IWIDRAERWA PQPLKLISGT TLGLVGFGAI GEALAPRAQA LGLNVIATRR SDKPIPTPGV
ERVADLATLF ARSDHVVLAA PATPETHRLI GREVLAAAKP GLHLINIARG ALIDDEALLE
ALDDGRVARA SLDVTHPEPL PEGHFFYNHP KIRLSPHTSV HTPDTRLNLA TRFAENLARF
RSGAPLADVV DLSRGY
|
|---|
| |