Gene Caul_2574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2574 
Symbol 
ID5900029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2797649 
End bp2800024 
Gene Length2376 bp 
Protein Length791 aa 
Translation table11 
GC content66% 
IMG OID641563065 
Product1A family penicillin-binding protein 
Protein accessionYP_001684199 
Protein GI167646536 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.95541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTGA AGCCTAGAGA ACGATGGATC GCCATCGCCG GCGTCGCGGT GCTGTCCGCG 
ATCGCCGTGG CCGGTTTCGC CATCGCCATC TACGCCGCGT GGCTGTTCCA CGACATGCCC
GACGCTGGCG AACTGCAGGA CTATCGCCCG CCAACCGCCA CGCGCGTCTA CGCCTGGGAC
GGCACCTTGA TCGGCGAATA TTCCAAGGAA CGGCGGATCT TCGTTCCGTA CGACCAGATC
CCGCCCCAAC TGGCCCAGGC CTTCCTGGCG GCCGAGGACC ATAACTTCTT CAAGCACGGC
GGCGTCGATG TCGGCGGCTT CTCTCGCGCC ATGCTCAACA ACGTTGGCAA CGCCGCGCGG
GGGCGGCGGC TGGAGGGCGG CTCGACCATC ACCCAGCAAG TGGCCAAGAA CGTCCTGCTG
ACCAGCGACG CCACCGTGGG CCGCAAGTTC AAGGAAGCGA TCCTGGCGCA CCGCCTGGAG
CAGTCGCTGG ACAAGCAGCA GATCCTTGAG CTGTACCTGA ACGAAATCTG GCTGGGCTAT
CGCTCGTTCG GGGTTGGCGC GGCGGCCTAC AACTATTTCG GCAAATCGCT GCCCGAGTTG
AGCCTAGCCG AATGCGCCTA TCTGGCCGCC CTGCCCAAGG GGCCGGACAA CTACCATCCG
ATCCGCAACA AGGCCAAGGC CAAGGCTCGC CGCGACTGGA TCCTGGGCCA GATGGCCGAA
CTGGGCTGGG TCAGCCAGGA AGACGCCCGC AAGGCGATGG CCGAGGACCT CGTCGTGCAG
CCGGCGCCCA GCCGGGCCAA GTATCGCGAC GCCGACTACT TCGTCGAGGA AGTGCGCCAG
CGGGGCGTGG CCACCCTGGG TCCGCGTCTC AGCGAGGGCG GCTACTATAT GCGCACCACC
CTGGATCCCA AGCTTCAGAC CGCTGCCCGG GTGGCGCTGA TGGAAGGCCT GGAGAAGTAC
GACCGCCGTC ATGGCTGGCG CGGCGCCTGG GGTCATGTCG AGACGCTAGA CGCCGACTGG
GAGAAGCAGG CTGTGAAGAA GGCCCCGCCG TCGGAACGCC GCGGCTGGAG GCCGGCCATC
GTCACCTCGG CCTCGGGCGG TGTCCGCCTG GCCAAGGGCG AAGGCGAGGG GGCCATCGCC
GGCGAGGACA TGGCCTGGGC CAACGCCACC AAGGGCCTGA AGGTCGGCGA TCTGGTGTTC
GTCGAAAAGT CCGACAGCTC GCCAGCCTAT CGCCTGCGCC AGGTCCCTGT CGTCAACGGC
GCCCTGGTGG CCATGGAGCC CTATACGGGC CGCGTGGTGG CCCTGGTCGG CGGCTATAGC
TTCTCATTGT CGAACTTCAA CCGCGCCACC CAGGCGATGC GCCAGCCGGG TTCGGCGTTC
AAGCCGTTCG TCTACGCCAC GGCCCTCGAG AACGGCTACA CGCCGGCCAG CGTCGTGGTC
GACAGCGCCA TCACGTTCAA GGGGGCCAAT GGCGAGGATT GGAGCCCTGA GAATTATCAC
AAGAAGTTCT ACGGAGCCCT GCCGCTGCGC AAGGGCCTGG AGCAGTCGAT CAACGCCATG
ACCGTGCGCC TGGCGCAGAG CGTCGGCATG AAGAAGATCG TCGAGACCGC CAAGAAGACC
GGCATCACCC GAGACATGGC GCCGGTGCTG GCCATGGCCC TGGGGGCTGG CGAGACCACG
CCCTTCAAGC TGACCACGGC CTATACGCCG TTCGTCAACG GTGGTCGTCG CGTCGAGCCG
CACTTGATCG AACTGGTGCA GGACCGCGAG GGCAAGGTGA TCTTCCGCGC CGACAAGCGC
GACTGCGTGC GCTGCAACGC CGGCTTCAAC GGCGACGAGA GCCCGCGCAT CCCGGCCTTG
GGCGAGCAAG TCATGGATCC AATCACCGCC TACCAGATCA CCTCGATGCT GCAGGGCGTG
GTTCAGCGCG GCACCGCGGC CCAGGCCAGC TCGCTGGGTT ATCCGCTGGC CGGCAAGACC
GGTACGACCA ACGAGTACCG CAGCGCTTGG TTCATGGGCT ATTCGCCCAA CCTGGTGGTG
GGTGTGTTCA TCGGCTTCGA CGACAATCGT TCGCTCGGCG AGGGCGAGAC AGGCGCGACC
GGGCCGGTGC CAATCTTCAT GGATTTCATG CGCGAAGCGC TGAAGGGTCA GCCAAAGACC
GAGTTCAAGG TCCCCAAGAA CGCCAAGTTC GCCATGGTCC GCGGCATCCG CGAAGCCTTC
CGGCCGGGCA CCGAGCCAAA GGTCGTCGTG CCCGCGGAGA GCACTGGACC GCAGCCCTAT
GGCGAAGCCT GGCCCGGCGG CCAGATCGGC GCGCCGCCTC CAGCCAACGC CGAAAAGCCG
CCGAACAAGG TCCCGGACAT CAGCGGGCTC TACTAA
 
Protein sequence
MDLKPRERWI AIAGVAVLSA IAVAGFAIAI YAAWLFHDMP DAGELQDYRP PTATRVYAWD 
GTLIGEYSKE RRIFVPYDQI PPQLAQAFLA AEDHNFFKHG GVDVGGFSRA MLNNVGNAAR
GRRLEGGSTI TQQVAKNVLL TSDATVGRKF KEAILAHRLE QSLDKQQILE LYLNEIWLGY
RSFGVGAAAY NYFGKSLPEL SLAECAYLAA LPKGPDNYHP IRNKAKAKAR RDWILGQMAE
LGWVSQEDAR KAMAEDLVVQ PAPSRAKYRD ADYFVEEVRQ RGVATLGPRL SEGGYYMRTT
LDPKLQTAAR VALMEGLEKY DRRHGWRGAW GHVETLDADW EKQAVKKAPP SERRGWRPAI
VTSASGGVRL AKGEGEGAIA GEDMAWANAT KGLKVGDLVF VEKSDSSPAY RLRQVPVVNG
ALVAMEPYTG RVVALVGGYS FSLSNFNRAT QAMRQPGSAF KPFVYATALE NGYTPASVVV
DSAITFKGAN GEDWSPENYH KKFYGALPLR KGLEQSINAM TVRLAQSVGM KKIVETAKKT
GITRDMAPVL AMALGAGETT PFKLTTAYTP FVNGGRRVEP HLIELVQDRE GKVIFRADKR
DCVRCNAGFN GDESPRIPAL GEQVMDPITA YQITSMLQGV VQRGTAAQAS SLGYPLAGKT
GTTNEYRSAW FMGYSPNLVV GVFIGFDDNR SLGEGETGAT GPVPIFMDFM REALKGQPKT
EFKVPKNAKF AMVRGIREAF RPGTEPKVVV PAESTGPQPY GEAWPGGQIG APPPANAEKP
PNKVPDISGL Y