Gene Caul_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2494 
Symbol 
ID5899949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2705893 
End bp2706480 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID641562985 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001684119 
Protein GI167646456 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.631151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATG AACGCCCACC CACGGGCCAC GACATCGAGC TGGCCGCCTT GGCGGCGGCT 
GGCGATCGCC GGGCCTTCGG CGAGCTGGTG CGTCGCCACG GCTCGGCCGT GCGAGGCCTG
CTGCGCCGGC TGGGGGCCGA TTCGGCCACC GCCGACGACA TCGCTCAGGA TGCGTTCCTG
GTCGGTTTCG AGCAGATCGC CGACTATCGC GGGGAGGGGG CCTTCGCGGG TTGGATCAAG
AAGACCGCCG CGCGGCTCTA TCTGCGCAAG GTCAAGCGCG AGGCGCGTTT CGTGCTGACC
GAAGCGCCCG AGGACGACGC GCCGATCCGT TCGGACGGTC CCGCCGCGAC GGCCGATCGC
CTGGACCTGG ACGAGGCGCT CAAGTCCCTG TCGAAAGCCG AGCGCCTGTG CGTTTCGCTT
TGCTACGGGG CCGACTGGTC GCACGCCGAG GCGGCCGAGG CCTTGAACAT CCCCCTTGGG
ACGGTCAAAT CCCATGTCAA ACGTGGTCTG GATAAACTCA GAACCCGGAT GGCCCCGCCG
TCCGAAAACG TATCGAACGA CTCCGGAAGG AGGGAAAGCC GTGGCTGA
 
Protein sequence
MGNERPPTGH DIELAALAAA GDRRAFGELV RRHGSAVRGL LRRLGADSAT ADDIAQDAFL 
VGFEQIADYR GEGAFAGWIK KTAARLYLRK VKREARFVLT EAPEDDAPIR SDGPAATADR
LDLDEALKSL SKAERLCVSL CYGADWSHAE AAEALNIPLG TVKSHVKRGL DKLRTRMAPP
SENVSNDSGR RESRG