| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2452 |
|---|
| Symbol | |
|---|
| ID | 5899907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2673640 |
|---|
| End bp | 2675283 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641562943 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001684077 |
|---|
| Protein GI | 167646414 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.654056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.754885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA TCCTGTCCTT TCACGGCGCC GCCGGCTGTG TCACCGGTTC CTGCGCGCGC
CTGCAAACGC AGGAGGCCAC GATCCTGATC GATTGCGGCA TGTTCCAGGG ATCAAAAACC
CTGAAGGCGC TGAACTATGG CGAATTTCCC TTTGATCCTC GCCAGATTGA CGCCGTCCTG
CTCACCCATG CCCATGTCGA TCATTGCGGC CTGCTTCCCA AGCTGATGCT GGCCGGTTTC
GAGGGGCCGA TCTACGCGAC GGCGGCGACG CGCGACCTCT GCGCGGTGAT GCTCGCCGAC
GCGGGGGGTA TTCAAGAAGG GGAGGTGGCG TCGCTCAACA GACGCAACCA GAGACGAGGC
CTGGCCCCGG TCGAGCCGAT CTACACCGAG GCCGACGCGG CCCGGGTCAT GAAGCAGTTT
CGCAAGGTCA AGCTGGGCGA GCCGGTGGCG GTCGCGCCCG AGATCTCGGC GATCTACTGG
GAGGCGGGCC ACATCCTCGG CTCGGCCTCG ATCGAGGTCG CCGTCGGCCC GGCTGGAACC
GAGCAGCGCC TGCTGTTCTC CGGAGACCTG GGCTCGGGCG GCAGCGATTT CGTCGCCGAT
CCGCAAGGCC CACGGGGCGT CGATCATCTG ATCGTCGAAT CCACCTACGG CGATCGCGAG
CGGGTGGCGG CCAGTGGGAC CGCGCGCCGC GCGGCCCTGG CCGAGGAGCT CAAGGCGGCG
CACGCCGCTG GTGGACCGCT GCTCATCCCC GCCTTCGCCC TGGAACGCAG CCAGGAACTT
CTGGTCGACC TGTTGCAGTT GATGGAGGAT GGGGACGCGC CACGCGGCGA CATCTTCCTG
GACTCGCCGC TGGCCATCGA GGCGTCCAAG GTGTTCCTCG ATCGAGGCTG GAACCCCGCT
CTCCAGCGTA ATCCGTTCGA GCCGGTCCGC CCCTCCGAGC ATCTGCGTTT TCTGGACAAG
CCCTGGGACA GCGACGGTCT GGAGCGGCTC TCCGGCTGGC ATGTGATCCT GGCGGCCAGC
GGCATGTGCG ACGCGGGGCG CGTGCGCAAA CACCTCAAGC GGTTGCTGTG GCGCAAGGAG
GCGACGGTTC TGCTGTGCGG GTTCCAGGCC GCCGGCACGC TGGGCCGGCT GCTGGCCGAC
GGCGCGCCGC GGGTCAGCAT CCAGGGCGAC GAGGTGCGGG TTCGCGCACG GGTGCGTAAG
CTCGACGCCT ATTCGGCCCA TGCCGACGCG ACGGCCCTGA CCCGCTGGAC GCGCGAGCGC
TCGCCCGTCA CCGGGTCGAT CCTCTTGGCC CATGGGGAGC CGAACGCCGC CGCCGGGCTG
CGTGATCGAT TGATCGCCGC CGGCTTCGAC GCCGGTGCGA TCTTGATCCC AGACTTGGAC
GACGCCTTCG ACATCACCGA CGGCGGGGCG ATTCCAAGAC AGCCGTCGCC GGCCCGGCTG
CCGCCGCACG CCGCTGCCAA GCTCGACTGG CACAATCACC GGGTCGCCTT TCAGATGGCG
CTCAACGCCG CCCTTGAAGG GGCGCGGGAC GACGCGGCCC GCGAGGCGCT GCTGCGCCGC
CTGAACGCGG TCGTCGAGGG GCCGTCCGGC GAGAGGACGC CCAGCCATTC CGCGCGCGAA
CATGAGCCGT TGGAGGAAAC TTGA
|
|---|
| Protein sequence | MTAILSFHGA AGCVTGSCAR LQTQEATILI DCGMFQGSKT LKALNYGEFP FDPRQIDAVL
LTHAHVDHCG LLPKLMLAGF EGPIYATAAT RDLCAVMLAD AGGIQEGEVA SLNRRNQRRG
LAPVEPIYTE ADAARVMKQF RKVKLGEPVA VAPEISAIYW EAGHILGSAS IEVAVGPAGT
EQRLLFSGDL GSGGSDFVAD PQGPRGVDHL IVESTYGDRE RVAASGTARR AALAEELKAA
HAAGGPLLIP AFALERSQEL LVDLLQLMED GDAPRGDIFL DSPLAIEASK VFLDRGWNPA
LQRNPFEPVR PSEHLRFLDK PWDSDGLERL SGWHVILAAS GMCDAGRVRK HLKRLLWRKE
ATVLLCGFQA AGTLGRLLAD GAPRVSIQGD EVRVRARVRK LDAYSAHADA TALTRWTRER
SPVTGSILLA HGEPNAAAGL RDRLIAAGFD AGAILIPDLD DAFDITDGGA IPRQPSPARL
PPHAAAKLDW HNHRVAFQMA LNAALEGARD DAAREALLRR LNAVVEGPSG ERTPSHSARE
HEPLEET
|
|---|
| |