Gene Caul_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2445 
Symbol 
ID5899900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2667332 
End bp2667976 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content64% 
IMG OID641562936 
ProductOmpW family protein 
Protein accessionYP_001684070 
Protein GI167646407 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.334993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.396638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TCCTGTTTGT GGCGGCGATT GCCGCGGGGC TGTCGGCTGG CGTTGCGAAC 
GCCGAAGATT TCCAACCCAA GGCAAAGGGC GATCTGATTG TGCACCTTCG CCTGACCGAC
GTGGCGCCCG ACAAGGACGC CTCGATCCTG ACCCGCGCCG GTGCGGCGAC CGGTCTGAAG
GCCCATGTCA GCGACGACGT GATGCCCACT CTGGGCTTCA CCTACTTCCT GACCGACAAG
ATCGCGGTCG AGGCGATCTT GGGCACGACC GAGCACAACA TTCGCGCCCA AGGACCGGGC
ACGGACGTCC TGACGCACAA GACCTGGGTC CTGCCTCCGG TCATTACGCT GCAGTATCAC
CCGCTTCCGG CCGCTCGGGT CAGCCCCTAT GTCGGCGCCG GGATCAACTA CATGCTGTTC
TACGGCGGCA AGGACAAGAA CGGCTTCAAG GTGAAGCTCG ACGACGGCTT CGGCTACGCC
CTGCAAGCCG GCGTGGACGT GGCGGTCAAG GGGCCGTGGT CGCTGAACGC CGATGTCAAG
AAGGTCTGGT TCCAGACCGA CGCCAAGATC AACGGCGGCG CGCTGAAGGC CAAGGTGAAC
CTGGATCCGA TCGTCGCGTC GGTCGGCCTT AGCCGCAAGT TCTAG
 
Protein sequence
MKKLLFVAAI AAGLSAGVAN AEDFQPKAKG DLIVHLRLTD VAPDKDASIL TRAGAATGLK 
AHVSDDVMPT LGFTYFLTDK IAVEAILGTT EHNIRAQGPG TDVLTHKTWV LPPVITLQYH
PLPAARVSPY VGAGINYMLF YGGKDKNGFK VKLDDGFGYA LQAGVDVAVK GPWSLNADVK
KVWFQTDAKI NGGALKAKVN LDPIVASVGL SRKF