Gene Caul_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2438 
Symbol 
ID5899893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2661082 
End bp2661825 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content64% 
IMG OID641562929 
Productcbb3-type cytochrome c oxidase subunit II 
Protein accessionYP_001684063 
Protein GI167646400 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0948451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.890644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCT GGAAGCATCA CGCCAAGTTC GAGCGCCACT CCCTGTGGCT GATCATCGGC 
ATCCTCGTCG TCGTGTCGAT CGGCGGCCTG GTCGAGATCG CGCCCCTGTT CTGGCTGCGG
GGCACGATCG AGAAGGTCGA CGGCATGCGG CCCTACACGC CGCTGGAGCT GGAAGGCCGC
GACATCTATG TCCGCGAGGG CTGCTATCTC TGTCACTCGC AGATGATCCG GCCCCTGCGC
GACGAGGTCG AGCGCTACGG CCACTATAGC CTGGCCGCCG AGAGCATGTA CGACCACCCC
TTCCAGTGGG GATCCAAGCG CACGGGTCCC GACCTAGCGC GGGTGGGCGG CAAGTACTCG
GACGCCTGGC ACCGCGACCA CCTGAGGGAT CCCCGCTCGG TGGTTCCGGA GTCGGTCATG
CCGCCCTACA AGTTCCTGGC GGACACCGAG CTCGACTATC GCGATCTGGT CGACAAGATG
AAGGCGCAGC GCACCGTCGG CGTGCCGTAC ACCGACGACG AGATCGCCAA CGCCAAGACC
GACCTGCAAG CCCAGGCCGA TCCCTATTCG ACCGACGCGA CCGCTCTGCG CAAGCGCTAC
GGCGCCAAGG TCGTCAATCG CGATTTCGAC GGCGATCCCG AGAAGATCAC CGAAATGGAC
GCCCTGGTGG CCTACCTGCA GATGCTGGGA ACCCTGGTCG ACTTCAATTC CTACAAGGCC
CAAGCGCCTG AGAACCAAAG GTAG
 
Protein sequence
MSFWKHHAKF ERHSLWLIIG ILVVVSIGGL VEIAPLFWLR GTIEKVDGMR PYTPLELEGR 
DIYVREGCYL CHSQMIRPLR DEVERYGHYS LAAESMYDHP FQWGSKRTGP DLARVGGKYS
DAWHRDHLRD PRSVVPESVM PPYKFLADTE LDYRDLVDKM KAQRTVGVPY TDDEIANAKT
DLQAQADPYS TDATALRKRY GAKVVNRDFD GDPEKITEMD ALVAYLQMLG TLVDFNSYKA
QAPENQR