Gene Caul_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2428 
Symbol 
ID5899883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2651328 
End bp2651939 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content69% 
IMG OID641562919 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001684053 
Protein GI167646390 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0553683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.487095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCTGG AGACCGGTTC GGAAAGACTG GAGGGGTCGT CGGATTCCCG GTGGCGCGCC 
GCGACGCCGG CAGGAGCTTG GATCGAGTCC TTGGACGACA GTGACGTCCA TCCCCTGCTC
GCCTGCTACC TCGAACGGCG GGAAGAGCTC GTGCGCTACT TCCGCGTCCG CCTGCGATCC
GAAGAAGCCG CCCAGGATCT GGTGCAGGAC ATCTACCTGA AGATCACCCC GCCGCCCGCC
GCGCCGATCG ACAACCCCGC GGCCTATCTC TATCGGCTCG GCACGAACCT GATGCTGGAT
CGGATCAAGA CCCAAAGGCG CGCGGGCCAG CGGGACGCCC AGTGGCGCGG CGCCGGCGGC
CCTAGCGCCA CGGACTGGGA GACGGCCGAC GAGCCTCGCG CCGACGACGC CCTGGCCGCC
CGCCAGCGCC TGGCCCAGAT CGTGGCGGTC GTGAACGATC TGCCGCCCGC GGTGCAGGAG
GCTTTCCGCC TACACAAGCT GGAAGGCCTC AACCACGCCG AGACGGCGGC GGCCATGGGC
GTGTCGCGGT CCAGCGTCGA GAAGTACATC ATGACCAGCC TCAAGCGCAT TGTCGCCAAG
GTGGGCCGAT GA
 
Protein sequence
MRLETGSERL EGSSDSRWRA ATPAGAWIES LDDSDVHPLL ACYLERREEL VRYFRVRLRS 
EEAAQDLVQD IYLKITPPPA APIDNPAAYL YRLGTNLMLD RIKTQRRAGQ RDAQWRGAGG
PSATDWETAD EPRADDALAA RQRLAQIVAV VNDLPPAVQE AFRLHKLEGL NHAETAAAMG
VSRSSVEKYI MTSLKRIVAK VGR