Gene Caul_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2427 
Symbol 
ID5899882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2650253 
End bp2651227 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content69% 
IMG OID641562918 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001684052 
Protein GI167646389 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.115573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCG CGGATGGCAT GACGGCGAGT GAAGCCCTGC GCGACGAAGC CGTCGCCTGG 
CTGGTTCGCG TCCAGTCGGA CCAGGCCAGC GCCGACGACT GGACGGCTCT GACCGTCTGG
CTGGAAGCTT CCGATGACCA TCTCGCGGCC TTCGAGGACG TCGAACGCGT CTCGGCCGAA
TTGACCGCGC GCGCCGCCGA GATCTCCCCG GCCCTGAAGC CCGCGACGTC GCGGATCGTG
CCGCTCCGGC GCCGCCCTGC CCTGCCCGTC TGGTTCGCCG CGGTGGCGGC CGCCGTGGTG
GCGATGGTCG TCGGCCCGAT GGCCTGGCGC GACTATCAGG GGGCGCCGAC GGTTTACCAG
ACCAAGCCAG GCGAAACCCG CGAGGTCGCC CTGGCCGACG GCACCCGCAT CCGCCTGGAC
GCGGCCTCGA CCCTGACCGT TCGACTGGGC TGGCGCGCCC GGCGCGTCGA GATGGCCGAC
GCCCAGGCGA CCTTCGACGT CGCCAAGGAC CCCGCCCGCC CCTTCCTGAT CTCGGTCGGC
GACCAGCAGG TGCGGGTCGT CGGCACGGAG TTCAACATCC GCCACTACGA CAAGACCGTT
CGAGTGACCG TCCGTCGCGG GATCGTCGAG GTGCGCCAAC CCGCCCTGGG TTCGACACCC
GTCGCCCGTC TCGTGGCCGG CCAGAGCCTG AGCCATGTCG AAGGCGCGCC ACGGTCGATC
CAGACCGCGA CCGATCCCAA CCCGGCCTTC GCCTGGACCC AAGGCCGGAT GGTCTGCGAC
GACGAGACCC TGGGTGAGAT GGTCGCCTAT TTGAATCGGC GCTACCCAAT TCCCATCAAG
GTTTCGCCCG CCCTGGCCGG CAAGCGCTTC TCGGGCGTGC TGGAACTGGG CGACGAGGAT
TTGGTGGTCA ATCGCCTGGC CGGCTATTTT TCCGCTTCCG TGCATCGCAC CGACCGTGAA
ATCGAACTAC GGTAA
 
Protein sequence
MNGADGMTAS EALRDEAVAW LVRVQSDQAS ADDWTALTVW LEASDDHLAA FEDVERVSAE 
LTARAAEISP ALKPATSRIV PLRRRPALPV WFAAVAAAVV AMVVGPMAWR DYQGAPTVYQ
TKPGETREVA LADGTRIRLD AASTLTVRLG WRARRVEMAD AQATFDVAKD PARPFLISVG
DQQVRVVGTE FNIRHYDKTV RVTVRRGIVE VRQPALGSTP VARLVAGQSL SHVEGAPRSI
QTATDPNPAF AWTQGRMVCD DETLGEMVAY LNRRYPIPIK VSPALAGKRF SGVLELGDED
LVVNRLAGYF SASVHRTDRE IELR