| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2407 |
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| Symbol | |
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| ID | 5899862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 2624525 |
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| End bp | 2627479 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641562898 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001684032 |
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| Protein GI | 167646369 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000117567 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.325532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG TCCAGCTTAT TTATCAGAGT AATGCGCCCA CGATCCAGCG CGCCTCGAAG
GCTGCTCTCG TCGGTGCGTC CAGCTTTCTG GCGCTCGCGC TTTGCGGCGC GGCCAACGCC
GCCGACCGGC CGGCCGAGGA GCCAATAACG ACGGCCGCGG CCGTCGCCGC GCCAACCGGC
GAGCAGGCTT CCGAGCCGAA ATCCAGCGGC GGCACGGTCG TCGAAGAAGT GGTTGTCACA
GGCCTACGCG GTTCGCTGCA ACGCAACCTC GACATCAAGC GGACGTCACC GGGCGTCGTC
GACGCCATTT CGGCCGAGGA CATCGGCAAA TTCCCCGATT CCAACGTCGC CGCATCATTG
CAACGCCTGC CGGGCGTCTC CATTCAGCGC GCGGGCGCGC GTGGCGAACC GCAGGGTATC
ACCGTTCGCG GCTTTGGCGG CGACTTCAAC GAGACCCTCT ACGACGGTCG TCGGATCTCC
ACGGCCACGG GCGGCCGCTC GGTGGACTTC AGCACCGTGG GCGCCGACTT CGTCGGCGGC
CTGTCGGTGC TCAAGACACC CGACGTCACA CTCTCGAGTA GTTCGATCGG CGCGACCGTC
AACGTCGCGT TTCCAAAGCC GTTCGATCAT CCCGGCCGGC GCATGGCGTT CACCGCCTCG
GGCTCGCTAC AGGACGACGC GGGCAAGGTG GCGCCCACCG TCGGCGCCCT GTTCAGCGAC
ACCTTCGCCG ATAACCGGTT CGGGATCCTG GTCGATGCGA TGTACACGCG CCACGACACC
CAGACCAACC GGGTCTATGT CAGCGGCTGG CCGGGCGGAC GCTACGCGCC GTGCCAATTG
ACGCCGACCT GCACGCCAAC CCGGTTGGCC GACAAGTCCA TCGTCGGATG GTTCGAGCAA
CAGTATGGCG CAAGCCAGAT CTATACCAAG GACGAGCGTG TCGATGGCCG CATCGCCCTG
CAATGGAGTC CGTCCGAAGA CCTGACGGTC ACCCTGGACG ACAACTACTC GCGTCAGAAC
ATCCGCGCCG ACAATTTCGG CTATGGCATC TGGTTTAATC AGGACGGCCT GAGAAACGTC
AAGCTGGACA AGAACGGGAC GACCGTCGAT TTCACCCAAG CCGGATCTCA GACCGATTTC
GTGGCTGGAA CCGATCGCTC GATCCTCCAG ACCAACCAGA CGGGTCTGAA CCTCAAGTGG
GACGTGTCCC AGAACCTGAA CTTCGAGGCG GACGCCAGCT ACGCCAAGAG CTGGCTCAAC
CCCGGCGGCG AGATCAGCAG CGACAACGCC GACGTGGGCT ACGGCTTCGC CATCGGCCCT
GCTCTGGGCA TCAGCATCGG CGGCGACAGC AAGAACACCC TGCCGGTGTT GCATGGCTAC
GGCCCAAACG GCGACGCCGC GCGCTGGGCC GACACTTCGG TCCTGGGCTC TCACGTCACC
GTGCGCCAAG CTCAGGAAAA CACCGACGTC GTCAAGCAAC TGCGGTTCGC CGGCTCGTGG
GAACAGGAAG GCTTCCGCAT CAAGGCCGGC GGCAGCTATC TGGAAGACCA CTACCAGTTC
CAGCAGAGCA ACACCTTCGT CAACAACTAC TGGCAAGCCT ATCCGGGCTA CGGCCCGCCA
TCGGGTCCCA ACGGCGGTGT CCTGGCGCCG TCCAGCCTGT TCACCGACAA GGTCAGCACC
AACCACTTCA TCCCCGGCTT CTCCGGCGCC CTGCCGCCGA CGCTGTTGAA GTTCGACGCC
CACGCCTATC AGCAGTTCCT CACGGCTCTT GGAAATCCCC AAACCCAGAC TATTCCGGGC
TTCAACTATA GCGGCGGCAA CGTCGGGACC ACGTTCACCG GCGCGTTCAA TCTGGGGCTC
GACAACGGCA GTATTCGCGA CATCACCGAG AAGACCTGGG CGCTGTTCCT GCGGGCCAAC
TTCGACGTCG ACGTGGCCGG CATGCCGTTC CACTTCAACG CCGGCGTACG CGAGGAGAAC
ACTCACGTCA CATCCAACGG CTTTGGTCAG GTGCCCACCG CGATCACCGG CAGCGCCGGC
GATCCGACGC TGCTGACCGT GACCTTGAGC GCGCCTCAGG CCGTATCGAC CAAGAGCAAC
TATTCCTACC TGCTCCCAAG CATCGACCTG AAGCTGGAAC TGACCGAGAG CATCCATCTG
CGCCTCGATG CGTCTCGAAC GTTGACCCGT CCGAGTCTGA ACCTGCTCAC GCCGGTGGCC
AGCGTCGGCA CCGGCCAGCG GGTCGGCGCC CTCACGGCCA GCGGTGGCAG CCCCTCGCTC
AAGCCTTATC TGGCCGACAA TTTCGATGCG GCGGTCGAAT GGTATTACCG GCCCAACTCG
TATGCGTCGG TCAATTTCTT CATCAAGGAC GTCAGCAACT TCATCATCGG CGGCACCCAG
CGACAGACGA TCAACGGCGT CATCGATCCC ACGACCGGCC AGCCGGCGAT CTTCAGCGTC
ACGCAGCAGG TCAACGGTCC GGAAGCGACC GTGCGTGGGG TTGAATTGGC CTGGCAACAC
GTGTTCGGCG ACAGCGGTTT CGGCTTCAAC GCCAACGCCA CCCTGGTCGA CACGAACAAG
CCCTACGATC GCACCGACAT CTCACAAAGC GGCTTTGCGA TCACCGGCCT GGCCGACTCC
GCCAACCTCG TGGCCTTCTA CGACAAGAAC GGTCTCGAAG CCCGGGTCGC GGTCAACTAT
CGCAAGGAGT ACCTGCGAGG CTTTGGTCAG AACCAGAACA CCGGCGCCTT CGGTTCTGAA
CCGACGTTCG AAAATCCGAA CCTGCAGATC GACTTCAGCA CCAGCTACGC CCTGACCAAG
CAGATCAACC TGTTCTTCGA AGCCCAGAAC CTCACCAACG AGACGCAGAG CACGCACGGA
CGGTTCGACA ACCAACTGCT CGACGTATTC GCCTATGGCC GGCGCTACAC CGCCGGCGCA
CGTTTCCGCT TCTAG
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| Protein sequence | MKTVQLIYQS NAPTIQRASK AALVGASSFL ALALCGAANA ADRPAEEPIT TAAAVAAPTG
EQASEPKSSG GTVVEEVVVT GLRGSLQRNL DIKRTSPGVV DAISAEDIGK FPDSNVAASL
QRLPGVSIQR AGARGEPQGI TVRGFGGDFN ETLYDGRRIS TATGGRSVDF STVGADFVGG
LSVLKTPDVT LSSSSIGATV NVAFPKPFDH PGRRMAFTAS GSLQDDAGKV APTVGALFSD
TFADNRFGIL VDAMYTRHDT QTNRVYVSGW PGGRYAPCQL TPTCTPTRLA DKSIVGWFEQ
QYGASQIYTK DERVDGRIAL QWSPSEDLTV TLDDNYSRQN IRADNFGYGI WFNQDGLRNV
KLDKNGTTVD FTQAGSQTDF VAGTDRSILQ TNQTGLNLKW DVSQNLNFEA DASYAKSWLN
PGGEISSDNA DVGYGFAIGP ALGISIGGDS KNTLPVLHGY GPNGDAARWA DTSVLGSHVT
VRQAQENTDV VKQLRFAGSW EQEGFRIKAG GSYLEDHYQF QQSNTFVNNY WQAYPGYGPP
SGPNGGVLAP SSLFTDKVST NHFIPGFSGA LPPTLLKFDA HAYQQFLTAL GNPQTQTIPG
FNYSGGNVGT TFTGAFNLGL DNGSIRDITE KTWALFLRAN FDVDVAGMPF HFNAGVREEN
THVTSNGFGQ VPTAITGSAG DPTLLTVTLS APQAVSTKSN YSYLLPSIDL KLELTESIHL
RLDASRTLTR PSLNLLTPVA SVGTGQRVGA LTASGGSPSL KPYLADNFDA AVEWYYRPNS
YASVNFFIKD VSNFIIGGTQ RQTINGVIDP TTGQPAIFSV TQQVNGPEAT VRGVELAWQH
VFGDSGFGFN ANATLVDTNK PYDRTDISQS GFAITGLADS ANLVAFYDKN GLEARVAVNY
RKEYLRGFGQ NQNTGAFGSE PTFENPNLQI DFSTSYALTK QINLFFEAQN LTNETQSTHG
RFDNQLLDVF AYGRRYTAGA RFRF
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