Gene Caul_2381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2381 
Symbol 
ID5899836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2588874 
End bp2589461 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID641562872 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001684006 
Protein GI167646343 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.599454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATATC TGCGCGACTT GGACCGATGG TTCATCGAGG AGGTGCTGCC GCACGAGCCG 
GTCTACCTGG CCCACGCGCG GCGCTTCTGC GGCAATGCCG ACGACGCGGC CGATCTGGTG
CAGGACGCCT ATGCCAAGCT GTTCGGGCTT GAGACCTGGC GTGGGCTGGT CAGTCCGAAG
GCCTACACCC TGACCATGAT CCGCAACCTG GCCATCCAGC GCCTGCGACG GGCGCGGGTA
GTCAGCATCC GCCAGATCGC GGGCCTTGAC GCTGGAGAGC TGGCCGACGA GGCCCCAAAC
GCCCAGCGCC AGACCATCGA CCGCGAACAG CTGCGGCGCC TCTTGAAGGC GGTCGAGCGG
TTGCCGGACC GCTGCCGCCA GATCGTCATC ATGCGCCGCT TCGAGGACAA GCCGCCGCAG
GAGATCGCCC GGCAGCTGGG CCTGAGCCTG TCGACCCTGG AGAAGCGCCT GGCGCGGGGC
ATGTTCCTGC TATCCCAGGC CATGGAGGCG GACGTCCGGG CGGTGGCTGA AACCCCAACG
TCGGCGGAGG CTGGGAAGAA GCCCGGACGG CGCGTTCGCG GCGACTGA
 
Protein sequence
MSYLRDLDRW FIEEVLPHEP VYLAHARRFC GNADDAADLV QDAYAKLFGL ETWRGLVSPK 
AYTLTMIRNL AIQRLRRARV VSIRQIAGLD AGELADEAPN AQRQTIDREQ LRRLLKAVER
LPDRCRQIVI MRRFEDKPPQ EIARQLGLSL STLEKRLARG MFLLSQAMEA DVRAVAETPT
SAEAGKKPGR RVRGD