| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2368 |
|---|
| Symbol | |
|---|
| ID | 5899823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2569397 |
|---|
| End bp | 2571535 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641562859 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001683993 |
|---|
| Protein GI | 167646330 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.59256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA AGAATTCACT CCGAACTTGG GCGCGCGCTC AACTTCTTCT TGGCGTGGCC
GCGGCGGCGC TCGCCGCGCC CGCCGGTGCG ATGGCGCAGG CGGCGATCGC CGCGCCAGAC
AAGGACGTGG TGACCCTGGA CGATATCATC GTGACGGCGC AAAAGCGCGA ACAGCGCCTT
CTGGATGTTC CCATGGCGAT CACCGCCTTC ACGGGCGAAG CGATCGAGCA GCGCGGCGCC
GCGAGCTTGC AGGACCTGCA GTTTTCCGTC CCAGGTCTGT CGCTCGTGGA GCAGGGGCCC
GGGCAGCAGC GGGTTCAGAT CCGCGGCGTG ACCACGTCGA ACGGTCTGCC AACCGTCGGC
CAATATCTCG ATGAAATGCC GATCAGTATC GACGACCAGA CTCAGACCCT CGATCTGCGC
CTCATCGACA TGAAGCAGAT CGAAGTGCTG CGAGGACCGC AGGGCACGCT CTATGGCGAA
GGCTCGATGG GCGGAACCAT CCGCTTCCTG ACCGCGGATC CCGACCTGGG CCAGATCGGC
GGAAGTTTCG AAGGTCAGGC GGGCTCCGTG ACCGATGGCG CCACGGCTTG GCGGGTGAAC
GGCGTCGTCA ACCTGCCGCT GGTCAAGGAC CGACTGGGTA TGCGGCTGGT GGCGGGATAT
GAGAACACCG GTGGCTGGAT CGACAGCTCG GTCACCGGCA AGAAGGATGT GAACGCGGCC
AAGATCCTCA CCCTGCGGGG CAAGCTTCTG GCGAAATTCA CAGACAATAT CCAAGCGTCG
CTCCTTGTCC TGCATCAGGA GCAGGACCAA GATTATCAAA ACTTCGGCGT GAGCCGTAAG
ACCTCGTCTC GCGTCGCCGA GCAGAACAAT CCCAAGTACG ATCTGGCCAA CCTCGTGCTC
AAGTGGGACC TTGGGAGCGC CAACCTGACC AACAGCCTGG GGTACCAGAA GGCGGAGAAC
AACACGGTTA CCGACCTGTC GAACACGTAT GTGCCCCTGC TGCCCCTGCT CGGCGTTCCC
GCCGGTCTCA TCACGAGCGT GGGTCTGGGG TCGACGTCGG ATGTCGACGT CTTGACTGAC
GAGGTTCGAC TGACATCGGC TGTGGGCGGC CAGTTCGACT GGTCGGCCGG GGCCTACGGC
CGGCATCTCA AGCGGACGGG AACGTCGAGG AGCGCGACGG CCCCTGGCAG CCTGGCCTTC
AATCTGATCT CGGTGACCGC GACCTTCGAA TCCAAGGCCT GGGCGACGTT CGGCGAATTG
AACTGGCACG CCACCGACGC CCTCACGATC ACCGGCGGCC TTCGCTATTT CGAAGAGACG
CGCACGCTTG AATCCGTCAA CCGCAGCTTC GGCGGGTTGG CCACGGCCTC CAACAGCGGC
AAGTTTTCAA GCCTCAATCC GCGCCTCAAT ATAAGCTACG ACGTCTCGCC GACAGGAATG
GTCTATGTTA GCGCGGCCAA GGGCTTTCGC AGCGGCGGCT TCAATCTGGC GGCCACGGGC
GGACCGCCCA CCTATGATCC GGACGAGCTG TGGACCTATG AGGTCGGCAC GAAGCATCAA
TGGTTCGATC GTCGCCTGAC CTTCGAAGGG GCGGCCTACT ACACCGATTG GACGGGTGTT
CAGAGCTCCT TCGTGCCGAC CGGCGCCGCC ATTGGCTACG TCACCAACGG CGGCAAGGTG
AACGGTTGGG GCGCGGACGT CTCGATGAGC GCACGCCCCG CGACGGGCCT TACGCTTAGC
GCGACCTACG GCTGGAACAA TCTGGAGTAC CAGGGCAAGA CCGCCGAACA TGCGCCCGGC
GATCCCGTGG ACTATGCGGT TCGGCAAAGC TGGTCCGGAT CGATCGACTA TCGCCGCCCG
GTGGTCGGAA ACGCGGAGGG CTTCGCCCGC CTAGATTATC AGCACGCCGG GCGCTCGGCG
ATCATCAATC GCGGTTCGGC CGTCAATGTC GCGATCGACC CCCGGGACTT GGTCAATGCC
CAACTGGGCG TGGAGTTCAG GCGGTATGAA GTCTCGCTGT TCGCCAGCAA CCTATTCGAC
GAGAAAACCC CGATCGTCCC GGGGCCGTTC GGCGCGATCT TCCAGGACAT CGAGCCGACG
CCGAGAATCG TCGGTGCGAG GTTCAAGGCG ACGTTCTGA
|
|---|
| Protein sequence | MTDKNSLRTW ARAQLLLGVA AAALAAPAGA MAQAAIAAPD KDVVTLDDII VTAQKREQRL
LDVPMAITAF TGEAIEQRGA ASLQDLQFSV PGLSLVEQGP GQQRVQIRGV TTSNGLPTVG
QYLDEMPISI DDQTQTLDLR LIDMKQIEVL RGPQGTLYGE GSMGGTIRFL TADPDLGQIG
GSFEGQAGSV TDGATAWRVN GVVNLPLVKD RLGMRLVAGY ENTGGWIDSS VTGKKDVNAA
KILTLRGKLL AKFTDNIQAS LLVLHQEQDQ DYQNFGVSRK TSSRVAEQNN PKYDLANLVL
KWDLGSANLT NSLGYQKAEN NTVTDLSNTY VPLLPLLGVP AGLITSVGLG STSDVDVLTD
EVRLTSAVGG QFDWSAGAYG RHLKRTGTSR SATAPGSLAF NLISVTATFE SKAWATFGEL
NWHATDALTI TGGLRYFEET RTLESVNRSF GGLATASNSG KFSSLNPRLN ISYDVSPTGM
VYVSAAKGFR SGGFNLAATG GPPTYDPDEL WTYEVGTKHQ WFDRRLTFEG AAYYTDWTGV
QSSFVPTGAA IGYVTNGGKV NGWGADVSMS ARPATGLTLS ATYGWNNLEY QGKTAEHAPG
DPVDYAVRQS WSGSIDYRRP VVGNAEGFAR LDYQHAGRSA IINRGSAVNV AIDPRDLVNA
QLGVEFRRYE VSLFASNLFD EKTPIVPGPF GAIFQDIEPT PRIVGARFKA TF
|
|---|
| |