Gene Caul_2326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2326 
Symbol 
ID5899781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2527911 
End bp2529134 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID641562817 
Productouter membrane efflux protein 
Protein accessionYP_001683951 
Protein GI167646288 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.347361 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCA TACTGCTTCT GGCGGGCAGC CTTAGCCTGG CCAGCGCGGC CCAGGCTGGC 
CCTCTGACCT TCGAAGCCGC TCAGCGGCTG GCCCTGCAGT CACCGGCTCT GGATGGAACC
GCCGCCGATC TGGAGGCCGC CAAGGCCCAG GGACGGGCGG CCGGCAAGTT GCCCGATCCC
AGGTTACGGC TGGGTCTGGA CAATGCCCCG ATCTCCGGAC CGCCGGCCGG GACGTTCGGC
GGCGACAGCA TGACCATGGT CAGCGTCGGC TTGATGCAGG ATCGGCCCAG CGCCGCCAAG
CGCGAGGCCG CGCGTCGAGC CGCTTCGGCG GAGGTCTCGA CCGCCGGCGC CCGCCAGGCG
CTGGTGGCGC GCGAGACGCG GCTGGCCGTC GCCCTGGCCT GGATCGATCT CTACTACACC
GACCAGAAGC TGGCCGCGCT CGCCGCGGTC GAGAAAGCGA TCACGCCGCT GCGCGACACG
ACGCCGGCTG CCTTGACGGC TGGCGACGCT CGCCCGGGCC AGACCCTGGA AGCGCAACAG
AAGCTGGCCC TGCTGGCCGA TCGGCGCAGC GAACTGCTGG CCGACCGCGC CCGCGCCGCC
GCCGAACTGA CCCGCTGGAC CGGAGAGCCA GGGCCACAAC CCATCGGACC GGCGCCCGAT
TTTCCCATCG ACCCCGAGAC GCTGCGCGCC GGCCTCCCCA ACCATCCCAG CCTCATGGCG
CTGGATGCGG CGCGCCAAAT GGCCGGAGCC CAGCTGGCCC AGGCCCGCGC CGAGGCCCAT
CCCGACACCA GTTGGGACAT CGCCTATCAG AAGCGCGACG GCGCCTACGG CGACATGGTG
TCGCTAGGAG TTACCTTCGG CCTACCGCTG TTTGGCCAAT CCCGGCGCGA ACCGCTAATC
GCCGCCCAGA GCGCGCGGGT TCGCGGCGCG GAGAGCCAGA AGGCGGCGGG CGCGCGCCAA
CTTCTCGCCG CGCTGGAGAG CGACCTCGCA GACCACCAGA TGCACCATGA GCAGTTGGCG
AGGGCCCAAG AGACCTTGGC GCCGCTGGCC CAGCAGCGCG CCGACCTGGA GACCGCCAGC
TACGGCGCCG GCCGCGCCAG CCTGACCGAC GTGCTCGGCG CTCTGCTCGA TCTGGCCGAG
ACCAAGCTTT CGATCCTCGA CCGCCAAGCC CTCGTCACGC GCGACAGCGC CAAGATCAAC
CTGACCTATG GAACCGCGTC ATGA
 
Protein sequence
MRFILLLAGS LSLASAAQAG PLTFEAAQRL ALQSPALDGT AADLEAAKAQ GRAAGKLPDP 
RLRLGLDNAP ISGPPAGTFG GDSMTMVSVG LMQDRPSAAK REAARRAASA EVSTAGARQA
LVARETRLAV ALAWIDLYYT DQKLAALAAV EKAITPLRDT TPAALTAGDA RPGQTLEAQQ
KLALLADRRS ELLADRARAA AELTRWTGEP GPQPIGPAPD FPIDPETLRA GLPNHPSLMA
LDAARQMAGA QLAQARAEAH PDTSWDIAYQ KRDGAYGDMV SLGVTFGLPL FGQSRREPLI
AAQSARVRGA ESQKAAGARQ LLAALESDLA DHQMHHEQLA RAQETLAPLA QQRADLETAS
YGAGRASLTD VLGALLDLAE TKLSILDRQA LVTRDSAKIN LTYGTAS