Gene Caul_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2297 
Symbol 
ID5899752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2495428 
End bp2498670 
Gene Length3243 bp 
Protein Length1080 aa 
Translation table11 
GC content66% 
IMG OID641562788 
ProductCzcA family heavy metal efflux protein 
Protein accessionYP_001683922 
Protein GI167646259 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.446981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCA GGATTCTCGA CTTCTCCGTC CGCGCGCGCT GGGCGGTCAT CGGCGTGGTG 
GCGCTGATCG CCGCGCTGGG CGTCTACAAC CTGGTTCGGC TGCCGATCGA CGCGGTGCCC
GACATCACCA ACAAGCAGGT GCAGATCAAC ACCGTCGTTC CGGCCTTGGC TCCAGCCGAG
GTCGAGAAAC TCGTCACCTT CCCGGTCGAA ACGGCCATGT CCGGCATCCC CGGCCTGGAA
AGCACGCGCT CGATTTCGCG CAATGGCTTT TCCCAGGTCA CCATCGTCTT TAAGGAAAAA
ACTGACCTCT ACTTCGCCCG TCAGCAGGTC TCAGAACGCT TGACGGGCGT TGGCCAGACC
CTCCCCGAAG GCGCACAGCC ATCCATGGGC CCGATCTCCT CGGGTCTGGG CGAGGTGCTG
ATGTGGACGG TCGCCTATGA TCATCCCGGC GGGCGCGGAG CCAAGGTCAA GGACGGCAGC
CCGGGCTGGC AGTCTGACGG CGCTTACCTG ACCACGACCG GGGAGCACCT GGGGGACGCC
ACGGCGCAGG CGGCATACCT GCGGGAGATC CAGGACTGGA TCGTGCGCCC GCAAATGCGC
AGCGTCGCCG GCGTCGCCGG CGTCGATTCC ATCGGTGGCT ATGAGAAGCA GTTCGCCGTG
CAGGCCGACC CCTCGCGCAT GGCCGCCTAT GGTGTGTCGT TCAGCGAACT GGCCAAGGCG
CTGGAAGCCG CCAATATCGC CGTGGGCGCC AACTTCATGG AGCGCGGCGG CGAGGCGTTT
CTGGTCCGGG CCGATGCGCG CGTCCGCACG GTCGATGAAA TCGGCAACGC GACCGTCGCC
AATCGCGACG GCGTGTCGGT GCGCGTTCGC GACGTCGCCA CGGTCAAGGT CGGTGGCGGC
TTGCGCACTG GCGCGGCGTC GGAGAACGGC GAAGAGGTCG TGGTCGGCAC CGTCCTGATG
TTGACCGGCG AGAATAGCCG CACCGTGGCT GGCGCCTCGG CCGAGCGCTT GCAGGAGATC
GCCAAGAGCC TGCCCCCAGG GGTCAAGGTG CAGATCACCT ATGATCGCTC CAAGCTGGTC
AACGCCACCA TCAAGACCGT CGAGAAGAAC CTCGTCGAAG GCGCCTTGCT GGTCATCGTG
GTGCTCTTCC TGCTGCTGGG GAACTTCCGA GCTGCGCTGA TCACCGCCTT GGTCATTCCG
CTGTCGATGC TGATGACCGC CATCGGCATG AACAAGCTGG GGGTGTCGGG CAACCTGATG
AGCCTGGGCG CCCTGGACTT TGGCCTGATC GTCGATGGCG CCGTGATCAT TGTCGAAAAC
AGCCTGCGTA GGCTGGCCGA GCGGCAGCAC CATGAAGGGC GCTTGCTGAC CCTCTCGGAA
CGTCTGGGCG AGACGCGTGA AGCCGCCCGT GAGATGATCG CCCCGACCGT CTACGGCCAG
GCGATCATCC TGCTGGTCTA CGCGCCGCTG CTGACCTTCA CCGGCGTCGA GGGCAAGACC
TTCTCGCCGA TGGCCATCAC CGTGATGCTG GCCCTGGCCG CGGCCTTTGT ACTGTCGCTG
ACCTTCATCC CGGCGATGAT CGCCTTGCTT ATTCGCGGCA AGGTCGCCGA GAAGGAAGTG
GCCATGGTCC GCTGGACCAA GGTTCGCTAC GAGCCGCTTT TGCGCAAGGC GGTCGCCAAG
CCGTGGCCGG TGATCGGCGC GGCCGTGGGC ATGTTTGTCC TGGCCATGGT CACCTTCTCG
TTCCTGGGCC GTGAGTTCAC GCCCCAGCTC GACGAGAAGG ACCTGGCCGT GCAGGCGCTG
CGGATCCCAT CGACCTCGCT GGAGCAGTCG CTGCGGATGC AGCGGCAGAT CGAGCGGACC
ATCGCCACCT TCCCGGAGGT GCAGTTCGTC TACTCCAAGA CCGGCACGGC CGAGGTGGCC
AGCGATCCGA TGCCGCCCAA CGCTTCGGAC AGCTTCATCA TTCTCAAGCC CCAGGATGAG
TGGCCCAACA AGAAGGAGAC CAAAGCCGAG CTCGTCACCC GCATGGAAAA GAAGCTCGAG
GGCCTGACCG GCAACGTCTA CGAGTTCAGC CAGCCCATCC AGATGCGGTT CAACGAACTG
ATCGCCGGCG TGCGCGGCGA CGTGGCCATC AAGGTTTATG GCGACGACCT GGACGCCATG
ACCAAGAGCG CCGGCGAGAT CGCCACGATC CTGCAGGGCG TCAAGGGCGC GGCTGACGTC
AAGGTCGAAC AGACCTCTGG CTTCCCGACC CTGGACGTCT CGCTGGACCG CGACGCCATC
GGGCGCCTGG GTCTGACGGT GGAAGAGGTC GCCGACACCC TGGCGGTGGC CATGGGCGGG
CGCGAGTCCG GCCTGGTCTT CCAAGGCGAC CGGCGCTTCG ACATCGTCGT TCGTCTGCCC
GACGCCACGC GCAACGACCT GGACGCGGTC GGAGCGCTGC CGGTAATGTT GCCGGAACGG
GCCGGCGGCG GCGCGCGCCT GTCGGTGCCG TTGCGCGACG TGGCCCGCTT TTCCTACTCG
GAAGGTCTCA ATCAGGTCAG CCGGGAGAAC GGCAAGCGTC GGGTGGTGGT CCAGGCCAAT
GTGCGTGGCA ACGACCTGGG CTCGTTCGTC TCCGAGGCTC AGGCCAAGGT CGATGCGCAA
GTCAAGCTGC CGGCTGGATC ATGGGTTGAA TGGGGCGGGC AGTTCGAGAA CCTCAAGGCC
GCGCAAGCGC GTCTGGCCCT GGTGGTCCCG CTCTGCTTCC TGCTGATCTT CGCCCTGCTC
TACATGGCCC TGGGGGGCTT CGCGCCAGCT TTGGCGGTGT TCTCGGCCAT CCCGCTGGCC
CTCGCTGGCG GGGTGTTTGG CCTTGCGCTT CGAGGCATCC CGTTCTCGGT CTCGGCTGCG
GTCGGGTTCA TCGCGCTCTC GGGCGTGGCC GTGCTCAACG GGCTGGTGAT GATGACCGCC
ATCCGCCAGC GGCTCGCCCA GGGTTTCGAG CTGGAAAAGG CGATCATCGA CGGGGCCATG
GAGCGGCTGC GTCCGGTGAT GATGACCGGT CTGGTCGCCT CCCTGGGCTT TGTGCCGATG
GCCCTGGCCA CCGAAACCGG CGCCGAGGTC CAGCGACCGC TGGCCACCGT GGTCATCGGC
GGCCTGATCA CCGCCACCGC CCTGACCTTG TTTGTCCTGC CGGCGATCTG CCGGTTCGTC
TTGCGCAAGA CCCCCAAGGC CTCGATGGGG CCTTCCGCGC CGTCCCAAGG GCAAGGAGCC
TAA
 
Protein sequence
MIGRILDFSV RARWAVIGVV ALIAALGVYN LVRLPIDAVP DITNKQVQIN TVVPALAPAE 
VEKLVTFPVE TAMSGIPGLE STRSISRNGF SQVTIVFKEK TDLYFARQQV SERLTGVGQT
LPEGAQPSMG PISSGLGEVL MWTVAYDHPG GRGAKVKDGS PGWQSDGAYL TTTGEHLGDA
TAQAAYLREI QDWIVRPQMR SVAGVAGVDS IGGYEKQFAV QADPSRMAAY GVSFSELAKA
LEAANIAVGA NFMERGGEAF LVRADARVRT VDEIGNATVA NRDGVSVRVR DVATVKVGGG
LRTGAASENG EEVVVGTVLM LTGENSRTVA GASAERLQEI AKSLPPGVKV QITYDRSKLV
NATIKTVEKN LVEGALLVIV VLFLLLGNFR AALITALVIP LSMLMTAIGM NKLGVSGNLM
SLGALDFGLI VDGAVIIVEN SLRRLAERQH HEGRLLTLSE RLGETREAAR EMIAPTVYGQ
AIILLVYAPL LTFTGVEGKT FSPMAITVML ALAAAFVLSL TFIPAMIALL IRGKVAEKEV
AMVRWTKVRY EPLLRKAVAK PWPVIGAAVG MFVLAMVTFS FLGREFTPQL DEKDLAVQAL
RIPSTSLEQS LRMQRQIERT IATFPEVQFV YSKTGTAEVA SDPMPPNASD SFIILKPQDE
WPNKKETKAE LVTRMEKKLE GLTGNVYEFS QPIQMRFNEL IAGVRGDVAI KVYGDDLDAM
TKSAGEIATI LQGVKGAADV KVEQTSGFPT LDVSLDRDAI GRLGLTVEEV ADTLAVAMGG
RESGLVFQGD RRFDIVVRLP DATRNDLDAV GALPVMLPER AGGGARLSVP LRDVARFSYS
EGLNQVSREN GKRRVVVQAN VRGNDLGSFV SEAQAKVDAQ VKLPAGSWVE WGGQFENLKA
AQARLALVVP LCFLLIFALL YMALGGFAPA LAVFSAIPLA LAGGVFGLAL RGIPFSVSAA
VGFIALSGVA VLNGLVMMTA IRQRLAQGFE LEKAIIDGAM ERLRPVMMTG LVASLGFVPM
ALATETGAEV QRPLATVVIG GLITATALTL FVLPAICRFV LRKTPKASMG PSAPSQGQGA