Gene Caul_2284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2284 
Symbol 
ID5899739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2479826 
End bp2481088 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID641562775 
Productouter membrane efflux protein 
Protein accessionYP_001683909 
Protein GI167646246 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.185931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA TCATGCGTGG ACGGCTGCGA TATGCAGCCG CCAGCGTAGC TGCGATCCTG 
GGCGCGTTGG CGTCCGGGCG CGGCGCGGCG GCCGATCCGG CCCCGCTCTT CAAGGATCTG
CTCGCCCAGG CCCAGTCCAA CGCGCCTCGC CTTGCCGAAG CCGCCGCTTC GGTGCGCCAA
GCCGAAGGGC TGGCTAGGCA AGCCTCGGCG CGGCCCAATC CCACCGTGGA TGTCGGGGTC
GAGAATTTCA GCGGAAGCGG AGTCTATAGC GGCGCCAACA ACGCCGAGAC GACGTTCTCG
CTCAGCCAGC CGCTGGAACT GGGCGGCAAG CGCGGCGCGC GCATCGCGGC GGGCCGGGCA
GGCCTGGACG CGGCGCGGGC GCGTCTGGTG CAATCGAAGG CCGACTACGC CTTCACCCTG
GCGGACGCCT ACGCCCAGGC CGAAGCAGCC GAACGCCGCG TCGCGCTCGC CCAGGAAGCG
GTGACCTTGT CGGACGAGAC CGTGCGCGCC TCGCGCGCTT TGGTCGATGC GGGCAAGGAA
GCCGAACTGC GCAGCCTGCA AGCCCAGGCC GCATTGACGT CGGCACGCGC CTCTCTCGAC
GAGGCCCGCG CCGAACGGAC CGGGGCTTTC GCGCGTCTGA CGGCGCTGGC CGGTTCGGCC
GCGCCGTTCA CCTCGCTGAC CGACAGCCTG CTGACCGCCT CCCAGTCGGC ATCTCTGAAC
CGCGATATCG ACGTCCTGGC CACCCCCGCC GTCCTGGCGG CCGAAGCCGA ACGAGAAGCA
GCGGCCAAGC GCGTTCGGAT CGAACGCATT CGGGCCGTGC CGGACGTGAC CGTCTCGGCC
GGCGTGCGCC GGTTCAGCGG TGACGATTCC ACGGCGCTGG TGGCAGGGGT TTCGATCCCG
ATCCCGGTGT TCGACCAGAA CCGCGGCAAC ATCACCGCCG CGCAGGGCGA GCTTCAGGGC
GCCGAGGCGC GGCTCAGCGC AGCGCGCCTG GACGCCGAAG CCGACGTCCG CACCGCTCTC
TTCCAGATTG ACGCCGCCCA GACGAGGGTC GGCGCCGCGA CCGAGGGCGA AACGACCGCT
GCCGAGGCCT ACCGGCTAAC GCGCATCGCC TACGAGGCCG GCAAGTCGCC GCTGGTCGAA
CTCATCAACG CGCGCCGTTC GCTGGCCGAG GCGCGCGCCC AAACCATCGA AGCCCAATTG
GCGCGCCTTC GCGCCGAAGC CGGCCTGGCG CGCCTGCAAG GCCGCCCCTT CGGAGATCGC
TGA
 
Protein sequence
MTLIMRGRLR YAAASVAAIL GALASGRGAA ADPAPLFKDL LAQAQSNAPR LAEAAASVRQ 
AEGLARQASA RPNPTVDVGV ENFSGSGVYS GANNAETTFS LSQPLELGGK RGARIAAGRA
GLDAARARLV QSKADYAFTL ADAYAQAEAA ERRVALAQEA VTLSDETVRA SRALVDAGKE
AELRSLQAQA ALTSARASLD EARAERTGAF ARLTALAGSA APFTSLTDSL LTASQSASLN
RDIDVLATPA VLAAEAEREA AAKRVRIERI RAVPDVTVSA GVRRFSGDDS TALVAGVSIP
IPVFDQNRGN ITAAQGELQG AEARLSAARL DAEADVRTAL FQIDAAQTRV GAATEGETTA
AEAYRLTRIA YEAGKSPLVE LINARRSLAE ARAQTIEAQL ARLRAEAGLA RLQGRPFGDR