Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2284 |
Symbol | |
ID | 5899739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 2479826 |
End bp | 2481088 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641562775 |
Product | outer membrane efflux protein |
Protein accession | YP_001683909 |
Protein GI | 167646246 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.185931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACTCA TCATGCGTGG ACGGCTGCGA TATGCAGCCG CCAGCGTAGC TGCGATCCTG GGCGCGTTGG CGTCCGGGCG CGGCGCGGCG GCCGATCCGG CCCCGCTCTT CAAGGATCTG CTCGCCCAGG CCCAGTCCAA CGCGCCTCGC CTTGCCGAAG CCGCCGCTTC GGTGCGCCAA GCCGAAGGGC TGGCTAGGCA AGCCTCGGCG CGGCCCAATC CCACCGTGGA TGTCGGGGTC GAGAATTTCA GCGGAAGCGG AGTCTATAGC GGCGCCAACA ACGCCGAGAC GACGTTCTCG CTCAGCCAGC CGCTGGAACT GGGCGGCAAG CGCGGCGCGC GCATCGCGGC GGGCCGGGCA GGCCTGGACG CGGCGCGGGC GCGTCTGGTG CAATCGAAGG CCGACTACGC CTTCACCCTG GCGGACGCCT ACGCCCAGGC CGAAGCAGCC GAACGCCGCG TCGCGCTCGC CCAGGAAGCG GTGACCTTGT CGGACGAGAC CGTGCGCGCC TCGCGCGCTT TGGTCGATGC GGGCAAGGAA GCCGAACTGC GCAGCCTGCA AGCCCAGGCC GCATTGACGT CGGCACGCGC CTCTCTCGAC GAGGCCCGCG CCGAACGGAC CGGGGCTTTC GCGCGTCTGA CGGCGCTGGC CGGTTCGGCC GCGCCGTTCA CCTCGCTGAC CGACAGCCTG CTGACCGCCT CCCAGTCGGC ATCTCTGAAC CGCGATATCG ACGTCCTGGC CACCCCCGCC GTCCTGGCGG CCGAAGCCGA ACGAGAAGCA GCGGCCAAGC GCGTTCGGAT CGAACGCATT CGGGCCGTGC CGGACGTGAC CGTCTCGGCC GGCGTGCGCC GGTTCAGCGG TGACGATTCC ACGGCGCTGG TGGCAGGGGT TTCGATCCCG ATCCCGGTGT TCGACCAGAA CCGCGGCAAC ATCACCGCCG CGCAGGGCGA GCTTCAGGGC GCCGAGGCGC GGCTCAGCGC AGCGCGCCTG GACGCCGAAG CCGACGTCCG CACCGCTCTC TTCCAGATTG ACGCCGCCCA GACGAGGGTC GGCGCCGCGA CCGAGGGCGA AACGACCGCT GCCGAGGCCT ACCGGCTAAC GCGCATCGCC TACGAGGCCG GCAAGTCGCC GCTGGTCGAA CTCATCAACG CGCGCCGTTC GCTGGCCGAG GCGCGCGCCC AAACCATCGA AGCCCAATTG GCGCGCCTTC GCGCCGAAGC CGGCCTGGCG CGCCTGCAAG GCCGCCCCTT CGGAGATCGC TGA
|
Protein sequence | MTLIMRGRLR YAAASVAAIL GALASGRGAA ADPAPLFKDL LAQAQSNAPR LAEAAASVRQ AEGLARQASA RPNPTVDVGV ENFSGSGVYS GANNAETTFS LSQPLELGGK RGARIAAGRA GLDAARARLV QSKADYAFTL ADAYAQAEAA ERRVALAQEA VTLSDETVRA SRALVDAGKE AELRSLQAQA ALTSARASLD EARAERTGAF ARLTALAGSA APFTSLTDSL LTASQSASLN RDIDVLATPA VLAAEAEREA AAKRVRIERI RAVPDVTVSA GVRRFSGDDS TALVAGVSIP IPVFDQNRGN ITAAQGELQG AEARLSAARL DAEADVRTAL FQIDAAQTRV GAATEGETTA AEAYRLTRIA YEAGKSPLVE LINARRSLAE ARAQTIEAQL ARLRAEAGLA RLQGRPFGDR
|
| |