Gene Caul_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2272 
Symbol 
ID5899727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2470440 
End bp2471171 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID641562763 
Productconjugal transfer protein TrbJ 
Protein accessionYP_001683897 
Protein GI167646234 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5314] Conjugal transfer/entry exclusion protein 
TIGRFAM ID[TIGR02780] P-type conjugative transfer protein TrbJ 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTT CTCGACGCCT CTCCCGTCGC CGCATGGCGG CGCTGCTCTG CGGCGCGTCC 
GCGCTGGCGG CCACGCCGGC CTTGGTCACC TCGGCCGTGG CCCAGGTCGC CGTCTACGAT
CCCAGCAACT ACGCTCAGAA CGTGCTGCAG GCGGCGCGAG CCTTGCAGCA GATCAACAAC
CAGATCAGCA GCTTGCAGAA CCAAGCTCAG ATGCTGATCG GCCAGGCGCG CAATCTGGCC
AGCCTGCCGT ATTCGTCGCT GTCGGCGCTG CAGCAGCAGG TCGCCGCGAC CCAGGCCCTG
CTCGGCGAGG CCCGCGCCCT GGCCTACAAT GTCCAGGACA TCCAGGAGGC CTTCCATCGC
CACTATGAGG TGGCCGATCT TCTCGCCACG GATGCCGACC TGACCGCGCG GGCCGAGGCC
CGCTGGACCA CCACGGTGGC CGGCTTCGAG GACGCCTTGA AGGTCCAGGC CGGCGTGGTC
GGCGGTCTTG AGACCAGCCG TGGCGAGATG CAGAGCCTGG TGTCGGCCAG CCAGGGCGCG
AGCGGCGCGC TGCAGGCGGC CCAGGCCGGC AACCAGCTCC TGGCCCTGCA GGCCCAACAG
CTCTCGGCCC TGACCGCCGT GGTGGTGGCC AACGGTCGGG CGCAGGCCCT GGAAGCGGCC
GACCGCGCCG CCGCGCGCGC CGACGCCAAG GCCCGCTTCT CCAAGTTCAT GGGAGCCGCG
CCCCAGCCAT GA
 
Protein sequence
MSVSRRLSRR RMAALLCGAS ALAATPALVT SAVAQVAVYD PSNYAQNVLQ AARALQQINN 
QISSLQNQAQ MLIGQARNLA SLPYSSLSAL QQQVAATQAL LGEARALAYN VQDIQEAFHR
HYEVADLLAT DADLTARAEA RWTTTVAGFE DALKVQAGVV GGLETSRGEM QSLVSASQGA
SGALQAAQAG NQLLALQAQQ LSALTAVVVA NGRAQALEAA DRAAARADAK ARFSKFMGAA
PQP