| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2252 |
|---|
| Symbol | |
|---|
| ID | 5899707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2446096 |
|---|
| End bp | 2447817 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641562743 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001683877 |
|---|
| Protein GI | 167646214 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.260313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGG AAAACGACTT CCGCATCCGG ATCGGCCGGC TTCGCGACAA GGGCGCCGGC
ACCGGGATCA AGGCTCGCGG GTTCGTCGGC GAAGTCCTGA CGGCGGCTCG GCGTTCGGGG
CTCGGGACGC TGGATCACGG GCCGCGCAGC CGCGCGGGCC GCTTCGGTCG CGGAAGCGGA
GCGCGTGGCC GCCTCGCGTC CCGGCGCGTG ATCATCAAGA CCCGCATCGT GCAGCATCGA
GGTTCGCGAT ATCGCGCGGC GCCGATGAAG ATGCATCTCA GCTACCTGCG CCGGCAGGGC
GCCACCCGCG ACGGCGAGCG CGCGGAGATG TTCGACCGGG ACGGTGTCGC CGACCATGAC
GCGTTCGCCA AGCGATGCGA GGAGGACCGC CACCATTTTC GCTTCATCGT CTCGCCGGAG
GATGCGGCAC GACTGGAGGA TCTGCGCTCC ACGACCCGCC AACTCATGGA GCGCGCCGAG
CGAGCGCTGG GGACGCGCCT GGATTGGGTC GCCGTCGACC ATTGGAACAC CGACAACCCC
CACGTCCATG TCCTGGTCCG CGGCGTTGCC GATGACGGAC GCGACCTGGT CATCAATCCT
GAGTTTCTGA AGCACGGCTT TCGGGGGTTG GCCGAAGATC TAGTGTCGCT GGAGCTTGGA
CCCAGAACCG AAGCGGAGGT CGCCGCCAGC CTCGATCGCG AGATGATCGC GGATCGTTGG
ACCCAACTCG ACCGGCGACT TCGCGATCTG GTGGACGAGG CAGGCGGGCT TGATCTTCGG
CCGGACACTG AGCGGCCGCG GACGGGCGAC ATCCGCCTGA CAGGCCGCGC CCAGCATCTA
GAACGGCTCG GGTTGGCCCA GGCCCAGGCG CCGGGCCGAT GGCGGTTGCC GGAAGATCTG
GAACCGCAGC TGCGCGCCCT GGCGGAGCGC GGCGATATCA TCAAGACCTT GCACGCCACG
CTGCGAGGGC AGGATCGAGA CCTGAACGCC ATCGTCATCG AGGGCCGCGA GCTTTCGATG
CCTGTGTTCG GCAAGCTGGC CGATCGAGGC CTTCATGACG AGCTGACCGG CCAGGCCTAT
GTCGTCGTCG ACGCGGTCGA TGGCCTGACC CACCACTTGC GGTTCAGTGA TCTGAATCAG
ACAGGCGACA CGCCTGTTGG TGGCCTGGTG GAGGTTCGCT CACGGGTTCT GGACGACGGC
GCCAGCCGCC TTGAGCTGAT CCACCGTTCT GACCTCGATC TGGCCACCCA GGCGACAGCA
TCGGGAGCGA CCTGGCTCGA CCGACAGATG GTTGCGCGTG AACCGCAGGT TCTAGCTCAG
GCGGGTTTTG GCCTGGAGGC GCGCGCCGCG CTCGATCAGC GGCGGGCGCA CCTGGAGACC
TTGGGCCTCG CCAATCGGGA GAGCGGCGCG CTGACGCCGG CGCGCAATTT GATCGCGACC
TTGCGCGGCC AGGAGGTGGC TCGGGTGGCG GCCAACATCA GGGCCGAGAC AGGGGCGACC
TTTGTCGAGA CGGGCAAGGG CGACATGGTC GCTGGCCTCT ACAGCCGGCG GCTGGACCTG
GTCTCCGGAC GGTTCGCGAT GATCGAGGAC GGGCTCGGAT TTCAGCTAGT GCCGTGGACG
CGGTCGCTCG ACGCCCAGCT TGGACGGGAG GTAAGGGGAG TGATGTCACC CAGCGGCGGC
ATGGACTGGT CGCTTGGCAA GAAGCGCGGG CTTGGACTCT AG
|
|---|
| Protein sequence | MRRENDFRIR IGRLRDKGAG TGIKARGFVG EVLTAARRSG LGTLDHGPRS RAGRFGRGSG
ARGRLASRRV IIKTRIVQHR GSRYRAAPMK MHLSYLRRQG ATRDGERAEM FDRDGVADHD
AFAKRCEEDR HHFRFIVSPE DAARLEDLRS TTRQLMERAE RALGTRLDWV AVDHWNTDNP
HVHVLVRGVA DDGRDLVINP EFLKHGFRGL AEDLVSLELG PRTEAEVAAS LDREMIADRW
TQLDRRLRDL VDEAGGLDLR PDTERPRTGD IRLTGRAQHL ERLGLAQAQA PGRWRLPEDL
EPQLRALAER GDIIKTLHAT LRGQDRDLNA IVIEGRELSM PVFGKLADRG LHDELTGQAY
VVVDAVDGLT HHLRFSDLNQ TGDTPVGGLV EVRSRVLDDG ASRLELIHRS DLDLATQATA
SGATWLDRQM VAREPQVLAQ AGFGLEARAA LDQRRAHLET LGLANRESGA LTPARNLIAT
LRGQEVARVA ANIRAETGAT FVETGKGDMV AGLYSRRLDL VSGRFAMIED GLGFQLVPWT
RSLDAQLGRE VRGVMSPSGG MDWSLGKKRG LGL
|
|---|
| |