| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2179 |
|---|
| Symbol | |
|---|
| ID | 5899634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2367128 |
|---|
| End bp | 2369815 |
|---|
| Gene Length | 2688 bp |
|---|
| Protein Length | 895 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641562670 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_001683805 |
|---|
| Protein GI | 167646142 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.227331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.514386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTTG ATACGCTGAC CAAGACGCAG TGGGTCTATT CGTTCGGGGG CGGGGGCGCC
GACGGCGACG CCAAGATGAA GAACCTGCTG GGCGGCAAGG GGGCCAATCT CGCCGAGATG
TCGTCCCTGG GCCTGCCGGT GCCGCCGGGC TTCACGGTGA CCACCGAGGC TTGCGTCCAC
TACTACGCCA ACGGCAAGCA GTACCCGGCC GAGCTGGCGC AGCAGGTGGC CGACGGCCTG
GCCAAGGTCG AGGCGATCAC CGGCAAGCGC TTCGGCGACG TTGCGAACCC GCTGCTGGTC
TCGGTGCGCT CGGGCGCCCG GGCCTCGATG CCGGGCATGA TGGACACCGT GCTGAACCTG
GGCCTCAATG ACGAGACCGT CGAAGGCCTG GCGATCCTCT CGGGCGACCG TCGCTTCGCC
TATGACAGCT ATCGCCGCTT CATCCAGATG TACTCGAACG TCGTGCTCGA CCTGGAGCAC
CACATGTTCG AGGAGATCCT CGACGACCAC AAGGAGCGCC TGGACGTCAC CGTGGACACG
GCCCTGACGG CCGACGACTG GACCGCGGTG ATCAAGGATT ACAAGGGCGC CGTGCGCGAC
GCCCTGGGCA AGCCCTTCCC GCAGGACGCC CAGGAGCAGC TGTGGGGCGC GGTCGGCGCC
GTGTTCGCCA GTTGGATGAA CGACCGGGCC AAGTTCTATC GCCGCATGCA CGACATCCCC
GAGGCCTGGG GCACCGCCGT CAACATCCAG TCGATGGTGT TTGGCAACAT GGGCGAGACC
TCGGCCACGG GCGTGGCCTT CACCCGCAAT CCGTCGAACG GCGACGCGCG CCTGTACGGC
GAGTTCCTGA TCAACGCCCA GGGCGAGGAC GTGGTGGCGG GCATTCGCAC GCCCCAGTCC
CTGACCAAGG CGTCGCGGGA GGAGATGGGC GACACCACCC CGTCGATGGA AGAGGCGATG
CCGACGGTGT TCGGCCAGTT CAAGACCGTG GTCGAGACGC TGGAACGCCA CTATCGCGAC
ATGCAGGACA TCGAGTTCAC CGTGGAGCAG GGCAAGCTCT ACATGCTCCA GACCCGCAAC
GGCAAACGCA CCGCCAAGGC GGCGCTGAAG ATCGCCGTCG ACATGGCCGC GGAGGGCGTG
ATCAGCCGCG AGGAAGCTAT CGGCCGCGTC GAGCCCGCTT CGCTTGATCA GTTGCTGCAT
CCGACCATCG ACCCCAGCGC CCACCGCGAC GTGATCGCCA AGGGCCTGCC GGCTAGTCCC
GGCGCGGCCA CCGGCAAGAT CGTCTTCGAT AGCGACGCCG CCGAAAAGGC CGCCGCCAAC
GGCGAGAGCG TCATCCTGGT GCGCGAGGAG ACCTCACCGG AGGACATCCA CGGCATGCAC
GCCGCCCGCG GCATCATCAC CGCCCGGGGC GGCATGACCA GCCACGCCGC CGTCGTGGCG
CGCGGCATGG GCCGGGCCTG CGTCTCCGGC GCCGGCGAAG TGGCGATCTT CCCCAAGGAG
GGCCTGTTCC GGGTTCGCGG CCGCGACTTC AAGGCCGGCG AAGTGATCAC CATCGACGGC
TCGACCGGCG AGATCCTGGC CGGCTCGCCC AAGATGATCG AGCCCGAGCT GACCGGCGAT
TTCGCCACCC TGATGGGCTG GGCCGACGAG GTCCGCCGCC TGAAGGTTCG CGCCAACGCC
GAGACGCCGC TGGACGCCAA GACCGCCCGC CAGTTCGGCG CGGAGGGCAT CGGCCTGTGC
CGCACCGAGC ACATGTTCTT CGACGACACC CGGATCGCCG CCGTGCGCGA GATGATCCTG
GCCGACGACG AGGCCGGCCG TCGCGCCGCC CTAGCCAAGA TCGCGCCCTT CCAGAAGGCC
GACTTCGTCG AGCTGTTCAC GATCATGGAA GGCCTGCCGG TCACCATCCG CCTGCTCGAC
CCGCCGCTGC ACGAGTTCCT TCCGCATACG GAAGAAGACG TCGTGGCCGT GGCGAAGGCC
ACTGGCCTGG ATGCCCACAA GCTGATGCAG CGGGCCAAGG AGCTGCACGA GACCAACCCC
ATGCTCGGCC ACCGTGGCTG CCGCCTGGGC GTGTCCTATC CCGAGATCTA CGAGATGCAG
GTCCGGGCGA TCATCGAGGC CGCCTGCGAC ATCTCGAAGT CCGGCAAGGC CGCGCCGATC
CCCGAGATCA TGCACCCGCT GGTCGCCAAG GGCGAGGAGA TGAAGTACCT GCGCGACCTG
ACCGACCGCA CCGCCAAGGC GGTGCTGGAA GAGCAGGGGA TCGCGATCGA ATACACGGTG
GGCACCATGA TCGAGCTGCC CCGCGCCGCC CTGCGGGCCG GCGACCTGGC CGCCAACGCC
GAGTTCTTCA GCTTCGGCAC CAACGACCTG ACCCAGACGA CGTTCGGCAT CAGCCGCGAC
GACGCCGGCA AGTTCCTGGG CGCCTATATC GACAAGGGCA TCTTCGACAA GGATCCCTTC
GTCTCGCTCG ACCAGGAGGG CGTTGGCGAC CTGATCCGCA TCGCCGCCGA GCGCGGCCGC
GCGGCTCGCC CGGGCATCAA GATGGGCATC TGCGGCGAGC ACGGCGGCGA CCCCGCCTCG
ATCGACTTCT GCGAGCGGGT CGGCCTGGAC TATGTGTCCT GCTCGCCCTA TCGCGTGCCG
ATCGCGCGGC TCGCGGCGGC GCAGGCGGCG CTGAACAACA AGGGGTAG
|
|---|
| Protein sequence | MPVDTLTKTQ WVYSFGGGGA DGDAKMKNLL GGKGANLAEM SSLGLPVPPG FTVTTEACVH
YYANGKQYPA ELAQQVADGL AKVEAITGKR FGDVANPLLV SVRSGARASM PGMMDTVLNL
GLNDETVEGL AILSGDRRFA YDSYRRFIQM YSNVVLDLEH HMFEEILDDH KERLDVTVDT
ALTADDWTAV IKDYKGAVRD ALGKPFPQDA QEQLWGAVGA VFASWMNDRA KFYRRMHDIP
EAWGTAVNIQ SMVFGNMGET SATGVAFTRN PSNGDARLYG EFLINAQGED VVAGIRTPQS
LTKASREEMG DTTPSMEEAM PTVFGQFKTV VETLERHYRD MQDIEFTVEQ GKLYMLQTRN
GKRTAKAALK IAVDMAAEGV ISREEAIGRV EPASLDQLLH PTIDPSAHRD VIAKGLPASP
GAATGKIVFD SDAAEKAAAN GESVILVREE TSPEDIHGMH AARGIITARG GMTSHAAVVA
RGMGRACVSG AGEVAIFPKE GLFRVRGRDF KAGEVITIDG STGEILAGSP KMIEPELTGD
FATLMGWADE VRRLKVRANA ETPLDAKTAR QFGAEGIGLC RTEHMFFDDT RIAAVREMIL
ADDEAGRRAA LAKIAPFQKA DFVELFTIME GLPVTIRLLD PPLHEFLPHT EEDVVAVAKA
TGLDAHKLMQ RAKELHETNP MLGHRGCRLG VSYPEIYEMQ VRAIIEAACD ISKSGKAAPI
PEIMHPLVAK GEEMKYLRDL TDRTAKAVLE EQGIAIEYTV GTMIELPRAA LRAGDLAANA
EFFSFGTNDL TQTTFGISRD DAGKFLGAYI DKGIFDKDPF VSLDQEGVGD LIRIAAERGR
AARPGIKMGI CGEHGGDPAS IDFCERVGLD YVSCSPYRVP IARLAAAQAA LNNKG
|
|---|
| |