Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2170 |
Symbol | |
ID | 5899625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 2355004 |
End bp | 2356542 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641562661 |
Product | ammonium transporter |
Protein accession | YP_001683796 |
Protein GI | 167646133 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0246241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.111123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA ACTTTAAACC GCTAGCCGGG CTGATGCTCG CGGCGACGCT GGCGGGGGCT CCGCTGGGCG CCGTCGCCTT CGCTCAGGAC ACAGCGGCGC CGGCCGCCGC CGCGCCCGCC GAGGCCGCGC CGGCTCCCGC CGCGCCCGCC GCCGCCGCCG CCGCTCCGGC TCCGGCCGCC GCGCCCGCCG CCATCGTCGA CAAGAACGAC AAGGGCGACA ACGCCTGGAT GCTCACCTCG AGCGTGCTGG TTCTGCTGAT GATCCTGCCG GGCCTGGCCC TGTTCTACGG CGGCCTGGTC CGCTCCAAGA ACATGCTGTC GGTGATGATG CAGGTCTCGA CCGTCGCCAT CATCGGCTTC GTCGCCTGGG TGCTGTGGGG CTACAGCTTC GCCTTCACCG ACGGCGGCAG CTGGGACCTC TTCGTCGGCG GCCTCAGCCG TCTGTTCCTC AAGGGCGTGA CCCCGGCCAG CAACGTCGCG ACGTTCTCGA CCGGCGTGGT GATCCCCGAG TTCACCTTCA TCTCGTTCCA GGCGACCTTC GCGGCCATCA CCGCCGCCCT CGTGGTCGGG TCGCTGGTCG AGCGCATGAA GTTCGCCGCC ATCGTCGCCT TCGCCGTCCT GTGGCCCCTG CTGTCGTACT ATCCGATGGC CCACATGGTC TGGTGGTGGC CGGGTCCTGA CGCCATCGCC CAGGCGCCGA CCGCCGCGAT CAAGGCTGGC CAGATCTGGA CCTGGGGCGC CCTGGACTTC GCCGGCGGCA CCGTGGTGCA CATCAACGCC GGTATCGCCG CCCTGGTCGG CGCCCTGATC CTGGGCAAGC GCCAAGGCTA CGGCAAGGAG CCGATGCCGC CGCACTCCCT GACCCTGACC CTGGTCGGCG CTGGCCTGCT GTGGGTGGGC TGGTTCGGCT TCAACGCCGG CTCCAACCTG GAATCCAACG GCTACGCCTC GCTGGCGATG ATCAACACCT TCGTCGCCAC CGCCGCCGCC GGCCTGTCCT GGATCGTCGT CGAGTGGGTC ACCAAGAAGA AGCCGTCGGC CCTGGGCCTG GCTTCGGGCG TCGTGGCCGG CCTGGTCGCC GTCACCCCGG CCGCCGGTTT CGCCGGCCCG ATGGGCGCGG TGATCCTGGG CCTGGTGGTC TCGCCGATCT GCATCTTCTT CTGCTCGGTC GTGAAGAACG CGCTGAAGTA CGATGACAGC CTGGACGCCT TCGGCATCCA CGGCATCGGC GGCATCGTCG GCGCCCTGGG CACCGGCCTG CTGGTCAACC CCGCCTGGGG CGGCGCCGGC ATCGTCGACT ACACCACCTG CGCCAAGGAC GGCGACATCT CGACCTGCGA CGCCCTGGCT TCGTACGAGC CGTTCGCCCA GCTCCTGATC CAGGCGAAGG CCGTGTGCCT GACCGTCCTC TGGTCGGCCG TCGCCTCGGC GATCGTCTTC TTCGTGATCA AGCTGGTCAT CGGCCTGAAG GCTTCGCCGG AAGCCGAGGA AGAAGGTCTG GACATCTCCG AACACGGCGA ACGCGCCTAC CACAGCTAA
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Protein sequence | MKLNFKPLAG LMLAATLAGA PLGAVAFAQD TAAPAAAAPA EAAPAPAAPA AAAAAPAPAA APAAIVDKND KGDNAWMLTS SVLVLLMILP GLALFYGGLV RSKNMLSVMM QVSTVAIIGF VAWVLWGYSF AFTDGGSWDL FVGGLSRLFL KGVTPASNVA TFSTGVVIPE FTFISFQATF AAITAALVVG SLVERMKFAA IVAFAVLWPL LSYYPMAHMV WWWPGPDAIA QAPTAAIKAG QIWTWGALDF AGGTVVHINA GIAALVGALI LGKRQGYGKE PMPPHSLTLT LVGAGLLWVG WFGFNAGSNL ESNGYASLAM INTFVATAAA GLSWIVVEWV TKKKPSALGL ASGVVAGLVA VTPAAGFAGP MGAVILGLVV SPICIFFCSV VKNALKYDDS LDAFGIHGIG GIVGALGTGL LVNPAWGGAG IVDYTTCAKD GDISTCDALA SYEPFAQLLI QAKAVCLTVL WSAVASAIVF FVIKLVIGLK ASPEAEEEGL DISEHGERAY HS
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