Gene Caul_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2170 
Symbol 
ID5899625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2355004 
End bp2356542 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content69% 
IMG OID641562661 
Productammonium transporter 
Protein accessionYP_001683796 
Protein GI167646133 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0246241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.111123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA ACTTTAAACC GCTAGCCGGG CTGATGCTCG CGGCGACGCT GGCGGGGGCT 
CCGCTGGGCG CCGTCGCCTT CGCTCAGGAC ACAGCGGCGC CGGCCGCCGC CGCGCCCGCC
GAGGCCGCGC CGGCTCCCGC CGCGCCCGCC GCCGCCGCCG CCGCTCCGGC TCCGGCCGCC
GCGCCCGCCG CCATCGTCGA CAAGAACGAC AAGGGCGACA ACGCCTGGAT GCTCACCTCG
AGCGTGCTGG TTCTGCTGAT GATCCTGCCG GGCCTGGCCC TGTTCTACGG CGGCCTGGTC
CGCTCCAAGA ACATGCTGTC GGTGATGATG CAGGTCTCGA CCGTCGCCAT CATCGGCTTC
GTCGCCTGGG TGCTGTGGGG CTACAGCTTC GCCTTCACCG ACGGCGGCAG CTGGGACCTC
TTCGTCGGCG GCCTCAGCCG TCTGTTCCTC AAGGGCGTGA CCCCGGCCAG CAACGTCGCG
ACGTTCTCGA CCGGCGTGGT GATCCCCGAG TTCACCTTCA TCTCGTTCCA GGCGACCTTC
GCGGCCATCA CCGCCGCCCT CGTGGTCGGG TCGCTGGTCG AGCGCATGAA GTTCGCCGCC
ATCGTCGCCT TCGCCGTCCT GTGGCCCCTG CTGTCGTACT ATCCGATGGC CCACATGGTC
TGGTGGTGGC CGGGTCCTGA CGCCATCGCC CAGGCGCCGA CCGCCGCGAT CAAGGCTGGC
CAGATCTGGA CCTGGGGCGC CCTGGACTTC GCCGGCGGCA CCGTGGTGCA CATCAACGCC
GGTATCGCCG CCCTGGTCGG CGCCCTGATC CTGGGCAAGC GCCAAGGCTA CGGCAAGGAG
CCGATGCCGC CGCACTCCCT GACCCTGACC CTGGTCGGCG CTGGCCTGCT GTGGGTGGGC
TGGTTCGGCT TCAACGCCGG CTCCAACCTG GAATCCAACG GCTACGCCTC GCTGGCGATG
ATCAACACCT TCGTCGCCAC CGCCGCCGCC GGCCTGTCCT GGATCGTCGT CGAGTGGGTC
ACCAAGAAGA AGCCGTCGGC CCTGGGCCTG GCTTCGGGCG TCGTGGCCGG CCTGGTCGCC
GTCACCCCGG CCGCCGGTTT CGCCGGCCCG ATGGGCGCGG TGATCCTGGG CCTGGTGGTC
TCGCCGATCT GCATCTTCTT CTGCTCGGTC GTGAAGAACG CGCTGAAGTA CGATGACAGC
CTGGACGCCT TCGGCATCCA CGGCATCGGC GGCATCGTCG GCGCCCTGGG CACCGGCCTG
CTGGTCAACC CCGCCTGGGG CGGCGCCGGC ATCGTCGACT ACACCACCTG CGCCAAGGAC
GGCGACATCT CGACCTGCGA CGCCCTGGCT TCGTACGAGC CGTTCGCCCA GCTCCTGATC
CAGGCGAAGG CCGTGTGCCT GACCGTCCTC TGGTCGGCCG TCGCCTCGGC GATCGTCTTC
TTCGTGATCA AGCTGGTCAT CGGCCTGAAG GCTTCGCCGG AAGCCGAGGA AGAAGGTCTG
GACATCTCCG AACACGGCGA ACGCGCCTAC CACAGCTAA
 
Protein sequence
MKLNFKPLAG LMLAATLAGA PLGAVAFAQD TAAPAAAAPA EAAPAPAAPA AAAAAPAPAA 
APAAIVDKND KGDNAWMLTS SVLVLLMILP GLALFYGGLV RSKNMLSVMM QVSTVAIIGF
VAWVLWGYSF AFTDGGSWDL FVGGLSRLFL KGVTPASNVA TFSTGVVIPE FTFISFQATF
AAITAALVVG SLVERMKFAA IVAFAVLWPL LSYYPMAHMV WWWPGPDAIA QAPTAAIKAG
QIWTWGALDF AGGTVVHINA GIAALVGALI LGKRQGYGKE PMPPHSLTLT LVGAGLLWVG
WFGFNAGSNL ESNGYASLAM INTFVATAAA GLSWIVVEWV TKKKPSALGL ASGVVAGLVA
VTPAAGFAGP MGAVILGLVV SPICIFFCSV VKNALKYDDS LDAFGIHGIG GIVGALGTGL
LVNPAWGGAG IVDYTTCAKD GDISTCDALA SYEPFAQLLI QAKAVCLTVL WSAVASAIVF
FVIKLVIGLK ASPEAEEEGL DISEHGERAY HS