Gene Caul_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2155 
Symbol 
ID5899610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2337953 
End bp2338696 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID641562645 
Producthemolysin A 
Protein accessionYP_001683781 
Protein GI167646118 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.482655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00924028 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTCCC AACCCACACG AAAGCGCGCC GACGTCCTGC TGGTCGAGAC CGGACTGTTC 
GAAACCCGCG CCAAGGCCCG GGCCGCCATC GAAGCCGGCC TGATCACCGC CGATGGCCGC
AAGGTCGCCA AGCCGTCCGA ACTGCTGGAA GACACCGTCA AGCTGGACGG CCGCCCGCCC
CATCCCTGGG TGGGGCGCGG GGCGCTGAAG CTGGTCCACG CGCTGGACCT GTGGGCGATC
GAGGCGGCCG GTCGGATCGC CCTGGATGTC GGCGCCTCGA CCGGCGGCTT CACCGAGGTG
CTGCTGGAGC GCGGCGCGGC CCGGGTCTTC GCCTGCGACG TCGGTCGCGA ACAGCTGCAT
CCTCGCCTGG CTCACCACGA GCGGGTCACC GACCTGTCGG GCGTCGACGC CCGGATCCTC
GACGAGGGCT ATCTGGACGC GACGCCGACC CTGGTGGTCA GCGACGTCAG CTTCATCTCG
GTGGAGAAGT GCCTGCCCGT GGCCCTGGAC CTGGCCGCGC CGGGCTCGGA TCTGGTCTGC
CTGATCAAGC CGCAGTTCGA AGCGGGCTTC GGCCGGGTGG GCAAGAACGG CATCGTCAAG
GATCCGGCGG TCATCGCCGA GTGCATCGCC TCGGTCTCGA CCTTCGTCGA GGACTCCGGC
TGGACAATCA AGGGCGTGAC GCAGAGCCCG ATCACCGGCG GCGACGGGCA GGAGGAGCAC
CTGCTCTGGG CCGTGAAGGA CTGA
 
Protein sequence
MTSQPTRKRA DVLLVETGLF ETRAKARAAI EAGLITADGR KVAKPSELLE DTVKLDGRPP 
HPWVGRGALK LVHALDLWAI EAAGRIALDV GASTGGFTEV LLERGAARVF ACDVGREQLH
PRLAHHERVT DLSGVDARIL DEGYLDATPT LVVSDVSFIS VEKCLPVALD LAAPGSDLVC
LIKPQFEAGF GRVGKNGIVK DPAVIAECIA SVSTFVEDSG WTIKGVTQSP ITGGDGQEEH
LLWAVKD