Gene Caul_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2125 
Symbol 
ID5899580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2290914 
End bp2291915 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content72% 
IMG OID641562614 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001683751 
Protein GI167646088 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.32848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC GTCTCGCCAG CCTGTTCGAA GCCAAGCCGC GCACCGCGGA GGACTGGGTC 
GTGCGCCTGG GCCGCCCCGA CTCGCCGCGT TCGACACTGG CGGCCTTCGA GCGCTGGCTG
GCGGCAGATC CGAAGAATCT CGCCGACTAT CAGGACGCCA AGGGTCTGCT GCGCGACACG
CGCGACCTGC GCGCCGAGTT CATCGGCGAG TTGAACTTTA TCCCGCCGGC GCCGACGGCC
GCGCGCCGCC GCGAGAAGAC CGGCTGGACG CCCGTGGCCC TGGCTGGTGG TCTGGTCGCC
GCCGTACTGG CCGTGGCCAT CGCCCCGACG CTGATTCACC GTCTCCAGGA CCCGCTGGCC
GGCGCCGTGA CCTACACGAC CGCCGTCGGC GAGATCCGCG AGGTGACCCT GGCCGACGGC
TCGGTCGTCA CGCTGGACAC AGCCACCACC CTGCGCGCCA AGGTCGATGG CAAGTTCCGT
CGCCTCGCCT TGGACAAGGG CGGCGCCTAT TTCGCGGTCG CCCACGACAA GGCCCACCCG
TTCCAGGTGG CCCTGGCCGA TCGGCAAGTC ATCGTCACCG GCACCCACTT CGCCACGAGC
CTCCGCGACG GTCGCGCCCG AGTGGAGCTG CTGGAGGGAT CGGTCGAGGT TTCGCAGCCC
CGACCCTCGG CCGAGCCCGT CCGTCTCATC CCCGGCGATC GGGTCAGTTA CCAGGTTGGC
GACGCGGTGC GGCGCGAGCC CCGGATCGAT CCGGTCACCG CCGTCGCCTG GCGCCAGCGC
CGGCTGGTGT TCCAGGACGC GGCTCTGTCC GAGGTCCTGG CCGAGCTGGG CCGCTATACC
GACGCCAGGA TTCGCCTGGC CGACCCGGCC CTGGGCCGCC AGCGCGTCAC CGTCATGCTG
CCGCTGGACG GCCGGGGCAC GGTGATCGAT CGCGCCGCCA AGGTGCTGCC GGTGATGCTG
AAGCGAACCG CCCCGGGCGA GGTCGTCGCC ACCGCGCGCT AA
 
Protein sequence
MLDRLASLFE AKPRTAEDWV VRLGRPDSPR STLAAFERWL AADPKNLADY QDAKGLLRDT 
RDLRAEFIGE LNFIPPAPTA ARRREKTGWT PVALAGGLVA AVLAVAIAPT LIHRLQDPLA
GAVTYTTAVG EIREVTLADG SVVTLDTATT LRAKVDGKFR RLALDKGGAY FAVAHDKAHP
FQVALADRQV IVTGTHFATS LRDGRARVEL LEGSVEVSQP RPSAEPVRLI PGDRVSYQVG
DAVRREPRID PVTAVAWRQR RLVFQDAALS EVLAELGRYT DARIRLADPA LGRQRVTVML
PLDGRGTVID RAAKVLPVML KRTAPGEVVA TAR