Gene Caul_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2120 
Symbol 
ID5899575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2283801 
End bp2284535 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content72% 
IMG OID641562609 
ProductLuxR family transcriptional regulator 
Protein accessionYP_001683746 
Protein GI167646083 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0535979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.194929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATAG CCGCCTTGAG TCTTGGCCGT CCCGCGGTTT CGGACGCGGG GTCCGACTCG 
CGAAACCTCG CCTCCGAACG GCGTGCGGCG GCCGGTCCCG ATCAGGGCCT GCGCGCGCTG
GCCCATGAGC ACGGCTTCTA TAGCGCCCTC TATCTGCACA TCGGCCATGC GGCCTGTGGA
CGGGCCGCCG CGCCGGAGGG ACCGCCGTCG CGGCTCGTCG CCTCGTCGCC GATCGCCTTG
CGCCAGTACG GCGAGGCGCT GACGGGCAGC AGCATCGCCC GGCGGGCCGC CGGCTCGCAC
CGGCCCTTCG CCTGGACCAA CACCGATGAA GACATGCCGG GGCTTTCCGG CCGCCATGTC
GGGTTGGCGA TCCCGGTGCA GGACCACGCC GCGGGGCCGG GGCTGGTCGC CCTGATCGGC
CAGGACCTGG ATCGGGTCCG CCGCCTGGCG CGCGAGGAGG CCGCAGCCCT GGCCTTCGCC
GCCGCCGAAC TGCACCAGAG CATCCTGGCC AGCGTACGGC CGGCGGCGAC CGCCGCTTTG
ACCGCGCGCG AGATCGAGTG CCTGCGGTTC GCCGCCGTGG GCCGCACCGT GGCCGACACC
GGCCAGGCGC TGGGGATCAC CAGCCGCACG GTAGAGTTTC ATCTGAAGAA CGTCGCCGAG
AAGCTGGACG CGACCAACAA GGTCCACGCG GTGGCGATCG CCGTCAGCCA GGGGTTGGTC
AGCCTTCGAG GTTGA
 
Protein sequence
MSIAALSLGR PAVSDAGSDS RNLASERRAA AGPDQGLRAL AHEHGFYSAL YLHIGHAACG 
RAAAPEGPPS RLVASSPIAL RQYGEALTGS SIARRAAGSH RPFAWTNTDE DMPGLSGRHV
GLAIPVQDHA AGPGLVALIG QDLDRVRRLA REEAAALAFA AAELHQSILA SVRPAATAAL
TAREIECLRF AAVGRTVADT GQALGITSRT VEFHLKNVAE KLDATNKVHA VAIAVSQGLV
SLRG