Gene Caul_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2106 
Symbol 
ID5899561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2254206 
End bp2254613 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content63% 
IMG OID641562595 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001683732 
Protein GI167646069 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.651872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTGC AAGACGACGA CCGTCTCTAC GACGACATCA ACATCACGCC GATGCTCGAC 
CTGGCCTATG TGCTGCTGAT CATTTTCATC ATCCTCACCA CGGCGTCGGT GCAGGGGATC
AAGGTGGACC TGCCTAAGGC CAGCGCGTCC ACCAGCCTGG CCGCGCCCAA GACCAAGGCG
ATCACCGTCA ACAGCAACGG CGACGTCTTC CTGGACGCCT ATCCAGTGAC GCTGCCCGAA
CTGGAGGAGC GGCTACGGAC TCTGAAGGCC ACCGAGCCGG AGTTTCCGAT CGTCGTCAAA
GGCGACGCCA CGGTCCAGTA CCAACGGGTG ACCGACGTTC TCGACCTGCT CCGGCGGCTT
GACCTCAATC AGGTCGGGCT GGTCACGGGG CGGGCCGAGC CGCGCTGA
 
Protein sequence
MQVQDDDRLY DDINITPMLD LAYVLLIIFI ILTTASVQGI KVDLPKASAS TSLAAPKTKA 
ITVNSNGDVF LDAYPVTLPE LEERLRTLKA TEPEFPIVVK GDATVQYQRV TDVLDLLRRL
DLNQVGLVTG RAEPR