Gene Caul_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2092 
Symbol 
ID5899547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2240584 
End bp2241003 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content70% 
IMG OID641562581 
Productputative general secretion pathway protein H 
Protein accessionYP_001683718 
Protein GI167646055 
COG category 
COG ID 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00990757 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.860283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCAA TTGGTGATCG CCGGGCCGGC GCGACCCTGG TCGAGGCCCT GGTCGTGATC 
ACGATCCTGG TCATGATCGG AGCCATCGTC TTTCCGGACC TGCGCTCCGG CGTGGGCCGG
GCCACCGCCC AACAGGCGGT CGCGGGTCTG CGGGCCGATC TGCGCATGGC TCGGGCGCAA
GCACTGACGA CCGGGGCGCG TGTCGATCTC GTCGTGGCCG AAGACGGAAC CGGCTATGGC
TGGACGCCAG GACCCCGGCG CGTACTCGTG CGCGGACTGA TGCTGCGGCC GGCCGGAACG
GCGGCCAGCT TTTTCCCGGA CGGCTCTTCC AGCGGCGGAC GCCTGGTGTT GGCGACCAAG
GGGCGCGGGT TCGACATCGG ACTCGATCCG GCGACGGGCG CTCTGGAAGC CGCGCGATGA
 
Protein sequence
MLAIGDRRAG ATLVEALVVI TILVMIGAIV FPDLRSGVGR ATAQQAVAGL RADLRMARAQ 
ALTTGARVDL VVAEDGTGYG WTPGPRRVLV RGLMLRPAGT AASFFPDGSS SGGRLVLATK
GRGFDIGLDP ATGALEAAR