| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2029 |
|---|
| Symbol | |
|---|
| ID | 5899484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2171765 |
|---|
| End bp | 2172049 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641562518 |
|---|
| Product | putative conjugal transfer TrbD transmembrane protein |
|---|
| Protein accession | YP_001683655 |
|---|
| Protein GI | 167645992 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5268] Type IV secretory pathway, TrbD component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.563542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC CGGCCACCTC TTCAGGCGTG GGGGTCTCGG GTTTCGAGAT CCCGCTGCAT
CGGGCGCTGA CCGCCCCGAT CCTGCTCGGC GGCGCGCCGC GGTCGATCGC CATCCTCAAC
GGCACCCTCG CTGGAGCCTT GGGCCTTGGT CTCCAGCAAT GGATCCCAGG TCTGGTGGTG
TGGGTGATCG GCCATAGCCT GGCGGTGTTC GCCGCCAAGC GGGATCCGGA CTTCGCGCCG
GTCCTGATGC GCCACCTGCG CCAGAAGGGG TGGCTACGAT GCTGA
|
|---|
| Protein sequence | MTGPATSSGV GVSGFEIPLH RALTAPILLG GAPRSIAILN GTLAGALGLG LQQWIPGLVV
WVIGHSLAVF AAKRDPDFAP VLMRHLRQKG WLRC
|
|---|
| |