Gene Caul_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2027 
Symbol 
ID5899482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2170426 
End bp2171427 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID641562516 
ProductP-type conjugative transfer ATPase TrbB 
Protein accessionYP_001683653 
Protein GI167645990 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID[TIGR02782] P-type conjugative transfer ATPase TrbB 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG TCCAGCCCGA AACCTTCGAA CGCCGCCGCA CAATGCTGCG CACGGCCATG 
GGGCCGGCCA TCCAGGCGGC CCTGGCCGAC CCGGCCGTCG TCGAGGTGAT GGTCAATCCC
GACGGGGTCC TGCGCCTTGA TCGCCTGGGC GAGGGCCGGG TCGATACCGG CGTGGTGCTG
GCCCCGGCCG AGGTCGAGCG GATCATCCGC CTGGTCGCCA GTCATGTCCG CGCCGAGGTC
CATGCCGGCG CCCCAATCAT CAGCGGTGAC CTACCGCCGC GCGGCGGCGC CCTGACCGGG
GAGCGGTTCG AAGGTGTTCT GCCGCCGGTG TCGGCCGGGC CGTGCTTTTC GATCCGCAAG
CCTGCCAGTC GGATCCACAC CCTGGACGAC TATGTCGCCG ACGGCGTGCT GGCCCCGGTC
CAAGCCGACC TGCTGCGCCA GGCCGTCGTC GATCGCCACA ACATCCTGAT CGTCGGGGCG
ACATCGGCGG GCAAGACCAC CTTGGCCAAC GCCCTCCTGG CCGAGGTCGC CAGGCACGAC
GAGCGGGTCG TCATCCTTCA GGACGTGCCG GAGCTGCAAT GCGCCGCGCC CGACTGCGTG
GCCCTGCGCA CGCGACCGGG CGTGGTCAAC ATGACCGATC TGGTGCGCTC GACCCTTCGG
CTGCGTCCCG ACCGCATCGT GGTCGGCGAG GTTCGAGGCG GCGAGGCGCT GGATCTCCTC
AAGGCCTGGA ACACCGGCCA TCCCGGCGGC CTATCCACCA TCCACGCCAA CTCCGCGCGC
TCAGCGCTCT ACCGGTTGGA GCAGTTGGTC CAGGAGAGCG TGGTCGCCGT GCCGCGCCGC
CTGATCGCCG AGGCGGTCGA TCTCCTGGTC TTCATACGTG GCCGGGGAAC CGGCCGACGT
GTCGAGAGCC TCGCCCGGGT CACGGGCCTC GACTCCGGCG GCGACTACCT CGTCGCCGAT
CTCGACCCTC CTCAGCTTAA AGCCCTAAGA CACGGAGATT GA
 
Protein sequence
MSLVQPETFE RRRTMLRTAM GPAIQAALAD PAVVEVMVNP DGVLRLDRLG EGRVDTGVVL 
APAEVERIIR LVASHVRAEV HAGAPIISGD LPPRGGALTG ERFEGVLPPV SAGPCFSIRK
PASRIHTLDD YVADGVLAPV QADLLRQAVV DRHNILIVGA TSAGKTTLAN ALLAEVARHD
ERVVILQDVP ELQCAAPDCV ALRTRPGVVN MTDLVRSTLR LRPDRIVVGE VRGGEALDLL
KAWNTGHPGG LSTIHANSAR SALYRLEQLV QESVVAVPRR LIAEAVDLLV FIRGRGTGRR
VESLARVTGL DSGGDYLVAD LDPPQLKALR HGD