| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2015 |
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| Symbol | |
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| ID | 5899470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 2158784 |
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| End bp | 2159305 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641562504 |
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| Product | conjugal transfer protein TraF |
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| Protein accession | YP_001683641 |
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| Protein GI | 167645978 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.494735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTAGCC GCGTGCTCAC CCCGCGCGGC CAGGCCCTGT TCGTCGCGGC CGGGCTCGCC
CTGGTCGGGC TCGCCGCGCC GCTCGCGCTC GATCCGGTCC CCCGCCTGGT ATGGAACGCC
AGCGCCAGCG CGCCCATCGG CCTTTGGCGG ATCACGCCCG GCGCGCCCGT TTCCGTGGGC
GACAGCGTGC TGGTCGAGCC GCCGCCCGCC GCGCGCCATC TGGCCGCCCA GCGTCACTAT
CTCCCGGCCA ACGTGCCGAT GATCAAGACC ATCGCCGCCG TCTCGGGCGA CAAGGTCTGC
GCGCGAGAGA CGGCTATCAC CATCGACGAT CGCCTCGCCG CCGTGCGGCG TCTCGCGGAT
CGCCAAGGCC GAAAACTGCC CTGGTGGCGC GGCTGCCTGC GCTTGTCCGA CGGCCAGGTG
ATGCTGCTCA ACAGCGCCCC GGACTCGTTC GACAGCCGCT ATTTCGGGCC GGTCGAAAAG
ACCGCGATCA TCGGCAAGGC GACCCCGCTA TGGCTGCGGT GA
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| Protein sequence | MFSRVLTPRG QALFVAAGLA LVGLAAPLAL DPVPRLVWNA SASAPIGLWR ITPGAPVSVG
DSVLVEPPPA ARHLAAQRHY LPANVPMIKT IAAVSGDKVC ARETAITIDD RLAAVRRLAD
RQGRKLPWWR GCLRLSDGQV MLLNSAPDSF DSRYFGPVEK TAIIGKATPL WLR
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