Gene Caul_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1989 
Symbol 
ID5899444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2139478 
End bp2140512 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content73% 
IMG OID641562478 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001683615 
Protein GI167645952 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC ACCAGACCCA ATCGAGATCG GCGAGCCCCA CGGCCGCGGA GCTGAAGACG 
GCGCGCGACG AAGCCGCGGC CTGGTACGCC AAGATGCACG GCAAGGTGAC GCACCGCGAG
GTGACGGACT TCTACGCCTG GCGCGCCGAC AGCCTCAACG ACGCGGCCTA CAGCCAGGTC
GAGGCCTTGA CCCAAGGCGT GCGCGACGTC GCCGGCGATC CCCGGATCCA AGCCATCGGC
CAGGATCTTC AAGCGCGGCG GCGACGGCGC GGCGGCGCCC TGGCCCGGCT CAAGGCCCGC
CCCGGTCCCT GGATCACGGG CGTGGGCCTA GCGGCGGCGG CCGTGCTGGC CGGCGTCCTG
CTCACCACCC AGCCCTTCGG CCAGACCTAT CGCACGGCGG TGGGCGAGCG CCGTATCGTG
GCCCTGGCCG ACGGCTCGAC GATCGACCTG AACACCGACA GCCAGGTGCG TGTGCGCCTG
TCGCGCGACC GAAGGGCGAT CACCCTGGAC AGGGGCCAGG CGCTGTTCGC CGTGGCCCAC
GACAGCGCGC GGCCGTTCAT CGTCACGGCC GGCGACACCG CCGTGCGGGC GGTCGGCACG
CGGTTCGAGG TCTACAGGAC CGGGGCCGCG GTGCGGGTGA TCCTGGCCGA GGGCCGCGTG
CAGGTGACCC AGGCCCACAC CCCGGCCCCG ACGATGATGC GGGCCGGAAC CCGGCTCGAC
CTCGCCGGCA AGGCCCCGGC CCGCCCCGTC GCCATCGACG TCGCCGCCGC TACCGGGTGG
ACGGAAGGAC GCCTGACGTT CCAGGACGCG CCGCTGGCCC AGGCCGTGGC CGAGGTCAAT
CGTTATAGCC GCAAGAAGGT GGTGCTCGGC CCAGGCGTCC CGGCCGACGA GTTGGTCAAC
GGGATCTTCG ACGCCGGCGA CACCACCGCC TTCGTCAAGG GCGTGGCCGC CTCGCTGGAC
CTGAAGAGCG CCGCCCGCGA CGACGGCGCG ATCGAACTGC GCGGTCCCGT GCCGACAGCC
ACGCCGAAGG CCTGA
 
Protein sequence
MSDHQTQSRS ASPTAAELKT ARDEAAAWYA KMHGKVTHRE VTDFYAWRAD SLNDAAYSQV 
EALTQGVRDV AGDPRIQAIG QDLQARRRRR GGALARLKAR PGPWITGVGL AAAAVLAGVL
LTTQPFGQTY RTAVGERRIV ALADGSTIDL NTDSQVRVRL SRDRRAITLD RGQALFAVAH
DSARPFIVTA GDTAVRAVGT RFEVYRTGAA VRVILAEGRV QVTQAHTPAP TMMRAGTRLD
LAGKAPARPV AIDVAAATGW TEGRLTFQDA PLAQAVAEVN RYSRKKVVLG PGVPADELVN
GIFDAGDTTA FVKGVAASLD LKSAARDDGA IELRGPVPTA TPKA