Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1969 |
Symbol | |
ID | 5899424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 2112360 |
End bp | 2112923 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641562459 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001683596 |
Protein GI | 167645933 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.874493 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTTGA AGGACGACGC CCATCGGGCC GACGCGCGCC CTCGCCTGCC ACCGCCCGAG CAGATAAGCC ACGCCTATCG CCGGCCGCTG ATGACCTATT TCCTGCGCCA CACCGGCGAC TACGCCGAGG CCGAGGATCT GACCCAGGAG GCGCTCTTGC GGGCGTTGCG CGCCGGAGCC GGCGAGGCGA TCGAGACCCC CGACGGCTTT GTCTTCACCA TCGCCTCCAA CCTGCTGCGC GACCGCGCGA GAAAGCGCAT CACCCGACAG GCCGACCGCC ATGTCAGCCT CTATCCGCCG GGCGACGGCG AGACCGCCGC CGAGCCCCTG CAACTCGCCA CTGAGGATTT TCCGGCCGAC CGCGTCCTGA TGGGTAAGGA GAAACTTCGA AGGACCCTCG ACGCCCTGGC CGAACTGCCC GATCGCACCC GGGAGATCTT CATCCTGTTT CGGGTCGAGC GCCTCCGCCA GACCGAAATC GCCGCCCGTC TGGGCATTTC GGTCAGCGCC GTGGAAAAAC ATGTTGTTCG GGCCGTGGCC CATCTGGCAC GGCGGTTCAG GTAG
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Protein sequence | MTLKDDAHRA DARPRLPPPE QISHAYRRPL MTYFLRHTGD YAEAEDLTQE ALLRALRAGA GEAIETPDGF VFTIASNLLR DRARKRITRQ ADRHVSLYPP GDGETAAEPL QLATEDFPAD RVLMGKEKLR RTLDALAELP DRTREIFILF RVERLRQTEI AARLGISVSA VEKHVVRAVA HLARRFR
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