Gene Caul_1969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1969 
Symbol 
ID5899424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2112360 
End bp2112923 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID641562459 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683596 
Protein GI167645933 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.874493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTTGA AGGACGACGC CCATCGGGCC GACGCGCGCC CTCGCCTGCC ACCGCCCGAG 
CAGATAAGCC ACGCCTATCG CCGGCCGCTG ATGACCTATT TCCTGCGCCA CACCGGCGAC
TACGCCGAGG CCGAGGATCT GACCCAGGAG GCGCTCTTGC GGGCGTTGCG CGCCGGAGCC
GGCGAGGCGA TCGAGACCCC CGACGGCTTT GTCTTCACCA TCGCCTCCAA CCTGCTGCGC
GACCGCGCGA GAAAGCGCAT CACCCGACAG GCCGACCGCC ATGTCAGCCT CTATCCGCCG
GGCGACGGCG AGACCGCCGC CGAGCCCCTG CAACTCGCCA CTGAGGATTT TCCGGCCGAC
CGCGTCCTGA TGGGTAAGGA GAAACTTCGA AGGACCCTCG ACGCCCTGGC CGAACTGCCC
GATCGCACCC GGGAGATCTT CATCCTGTTT CGGGTCGAGC GCCTCCGCCA GACCGAAATC
GCCGCCCGTC TGGGCATTTC GGTCAGCGCC GTGGAAAAAC ATGTTGTTCG GGCCGTGGCC
CATCTGGCAC GGCGGTTCAG GTAG
 
Protein sequence
MTLKDDAHRA DARPRLPPPE QISHAYRRPL MTYFLRHTGD YAEAEDLTQE ALLRALRAGA 
GEAIETPDGF VFTIASNLLR DRARKRITRQ ADRHVSLYPP GDGETAAEPL QLATEDFPAD
RVLMGKEKLR RTLDALAELP DRTREIFILF RVERLRQTEI AARLGISVSA VEKHVVRAVA
HLARRFR