| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1910 |
|---|
| Symbol | |
|---|
| ID | 5899365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 2050550 |
|---|
| End bp | 2051323 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641562400 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001683537 |
|---|
| Protein GI | 167645874 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.621391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CAGCCCCCCT CTTCGGCAAG CGAATTATCG TGACCGGCGC CGCGCGCGGC
ATCGGAGCCA GCGCCGCCAG GGCGCTGGCG GCGGCTGGCG CCACTGTCAC GGGCCTCGAC
ATCACGATGA CGTCGGTTGA AACGCCCGCC CCCAAGGGTC CTGGACGCCT GATCCATGGC
GTGTGCGACG TGTCGTCGCG CCCCTCGACA ACGGCCGCCG TGGAACAGGC GGTGGCCGAA
ATGGGCGGTC TCGACGCGCT CATCCATGTC GCCGGCCTCC AGCGCTACAC CCCCGCCGAG
GAGATCACCG ACGAGGAATG GGACCTCGTG CTCGGCGTCA ACGCCAAGGG CACGATGATC
ACCAACCAGG CCGCCTTTCC TCATCTCAAG GACCGAGGCG GCCGCATCGT CAATTTCGCG
TCCGCCGCCG GCGCCATGGG CCTGCGCGGC TGCGCCCACT ACGCCGCCTC GAAGGGCGCC
GTCCTGGCCT GGACCCGCAC GATCGCCCAG GAATGGGGAC GCTATGGGAT CTCGGCCAAC
GCGGTCGCGC CCGGAATGTG GACCCCGATG TACGACACGA CCCGCTCGGG CATGTCGCCG
GAACAACTGG AGGCCCACGA CCGGGGCATG GCCATGATGA TCCCCCTGGG GGGACGACTG
GGCGATCCCG ACACGGACAT GGCCCCGGTT CTGGTATTTC TCGCCAGCGA CGCGTCGCGC
TTTATCACCG GCCAGACCTT GGCGGTGGAC GGCGGATTGA TGATGGTGCG CTAG
|
|---|
| Protein sequence | MTDTAPLFGK RIIVTGAARG IGASAARALA AAGATVTGLD ITMTSVETPA PKGPGRLIHG
VCDVSSRPST TAAVEQAVAE MGGLDALIHV AGLQRYTPAE EITDEEWDLV LGVNAKGTMI
TNQAAFPHLK DRGGRIVNFA SAAGAMGLRG CAHYAASKGA VLAWTRTIAQ EWGRYGISAN
AVAPGMWTPM YDTTRSGMSP EQLEAHDRGM AMMIPLGGRL GDPDTDMAPV LVFLASDASR
FITGQTLAVD GGLMMVR
|
|---|
| |