| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_1909 |
|---|
| Symbol | |
|---|
| ID | 5899364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2049666 |
|---|
| End bp | 2050547 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641562399 |
|---|
| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
|---|
| Protein accession | YP_001683536 |
|---|
| Protein GI | 167645873 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.352003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTAT TGTCATTCGA GTTGAACGGC GCGCCGGCCG TGGGCGTGCG CCTGGGCGAG
GAGGTCATTG ATCTGGGCGC CGCCGCGCCG GATCTGCCAC GCGATATCCA GGCGTTGCTG
GCGGCGGGTC CCGAAGCGCT GGCTGCGGCG GAGCGCGCCG CGGCGGCCGC GCCGGGCCAC
GCGCGTCATC CGCTCGCGGG CGTGCGTCAC CTGGTTCCAA TTCCCCGGCC GGACAAGATC
ATCGGTCTGG GCAAGACCTA TATGAAACAC GTCGCCGAGA TGAAGGCCGA GTCGTCGTCG
TTTCCGGGGA TGTTTCTTCG CGTCCCCGAT TCCCTGGTGG CGCACAACCA GCCGATCTGG
CGGCCTGAGG CCTCGGACAC GCTCGACTAC GAGGGCGAGT TGATGGTGGT CATCGGCCAG
GGCGGCCGCA TGATATCGCG CGAAAACGCC CTCAAGCACG TGGCCGGCTA CGCCTGTCAC
AACGACGGCA GCGTGCGCGC CTACAACTAC ATTCCCTCGG CGGTCACCGC CGGCAAGAAC
TTCCTCAATA CGGGCGGGTT CGGACCCGAG ATCGTGACCG CGGACGAGCT ACCTCCCGGC
TGCAAGGGGC TGAGGCTCAC GACCCACGTC AATGGCGACT TGAGGCAGAG CGCCGATGTC
GCCGAGCTAC ACTGGGACGT CGCCCACCTG GTCCACCTGA TGTCGACCAT CTTCACCCTC
TACCCTGGCG ATCTGATCGC CACCGGAACG CCATCGGGCT GCGCGGCCGC GTCCGCCAAT
CCGCAATGGC TCGTCCCGGG CGACGTCGTG CGCGTGGAAA TCGAGGGCGT CGGCGTGCTG
GTCAACCCGA TCGTGGACGC CCCCAGGGTC GCGCCGAGCT AG
|
|---|
| Protein sequence | MRLLSFELNG APAVGVRLGE EVIDLGAAAP DLPRDIQALL AAGPEALAAA ERAAAAAPGH
ARHPLAGVRH LVPIPRPDKI IGLGKTYMKH VAEMKAESSS FPGMFLRVPD SLVAHNQPIW
RPEASDTLDY EGELMVVIGQ GGRMISRENA LKHVAGYACH NDGSVRAYNY IPSAVTAGKN
FLNTGGFGPE IVTADELPPG CKGLRLTTHV NGDLRQSADV AELHWDVAHL VHLMSTIFTL
YPGDLIATGT PSGCAAASAN PQWLVPGDVV RVEIEGVGVL VNPIVDAPRV APS
|
|---|
| |