Gene Caul_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1872 
Symbol 
ID5899327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2007778 
End bp2009052 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content68% 
IMG OID641562362 
Productdehydrogenase catalytic domain-containing protein 
Protein accessionYP_001683499 
Protein GI167645836 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCTCT ATCAGTTCCG GCTGCCCGAT ATCGGCGAAG GCGTCGCCGA GGCCGAAATC 
GTCGCCCTGC TGGTCAAGGT CGGCGATGTG GTCGAGGAAG ACCAGAACCT GGCCGAGGTG
ATGACGGACA AGGCCACGGT TGAACTCAGC TCGCCCGTCG CCGGCGTCGT GACGGCCGTC
CATGGTGAGA TCGGCGGCAT GATGCCGGTC GGCGCCGTGC TGATCGAATT CGAGAGCGAA
GCGGGCGACG ATCGGGCTGT CGCCGCTCCG GCGTCGCCCC CTTCGGCCAC GCCGGCTCCC
GCTACGGCGG CCACGCCTCG GAGTTCGGCG CCCGCCCCAA CCGTCTCAAC TGCGCCGCCC
CCCGCGCCGG CGTCCCGCCG GGCCGCCTCG TCCGGCCGCC CGGCGGGAGA GGCGCCGCTC
GCTGCTCCCT CGACCCGTCG GCGCGCCCTC GATCTGGGGG TTTCTCTGGT TCAGGTGCCC
GGCACCGGTC CCGGCGGGCG GATCATGCCG GCAGATCTCG ACGCTTTCCT CGCCTCCGAT
GGACAGAACG CGGGCGGTTC GGGCCTCGTC GCCCGCACAG GGGTCCATGA CACGCGCATC
ATCGGATTAC GGCGCAAGAT CGCCGAGAAG ATGCAGGAGG CCAAGCGCCG CATCCCGCAC
ATCAACTATG TCGAGGAATG CGATCTGACA GAGCTGGAAG CGCTGCGGCT CGACCTCAAC
GAGCACCGCG CCGACGATCA GCCCAAGCTG ACGCTGTTGC CGTTCATCAT GCGGGCGATG
GTCAAGGCCC TGCCGGACTT CCCGCAGATC AACGCCCACT ATGACGACGA CAACGGCGTG
CTGCACGCGC ACGAAGGCGT CCACATCGGC ATCGCCACCC AGACGCCCAA CGGCCTGATC
GTCCCGGTCG TGCGTCACGC CGAAGCGCGA GACATCTGGG ATTGCGCCCG CGAGGTCGCG
CGGTTGGCCA AGGCCGTGCG CGACGGCTCG GCGGCCCGGG ACGAACTGTC CGGTTCGACC
ATCACCCTGA CCAGCATGGG CCCCCTGGGG GGCATCGTCT CGACGCCGGT GATCAACCAT
CCCGAGGTCG CCATCCTCAA TCCCAACAAG CTGGTGGACC GGCCGATGGT CCAGGGATCG
TTCATCACCG TCCGCAAGAT GATGAACCTG TCCTCGGCCT TCGATCACCG CATCGTCGAC
GGTTACGACG CCGCTCTGTT CGTCCAGCGC GTCAAGCGGC TGCTCGAGCA CCCCGCCCTG
ATCTTCATGG ATTGA
 
Protein sequence
MGLYQFRLPD IGEGVAEAEI VALLVKVGDV VEEDQNLAEV MTDKATVELS SPVAGVVTAV 
HGEIGGMMPV GAVLIEFESE AGDDRAVAAP ASPPSATPAP ATAATPRSSA PAPTVSTAPP
PAPASRRAAS SGRPAGEAPL AAPSTRRRAL DLGVSLVQVP GTGPGGRIMP ADLDAFLASD
GQNAGGSGLV ARTGVHDTRI IGLRRKIAEK MQEAKRRIPH INYVEECDLT ELEALRLDLN
EHRADDQPKL TLLPFIMRAM VKALPDFPQI NAHYDDDNGV LHAHEGVHIG IATQTPNGLI
VPVVRHAEAR DIWDCAREVA RLAKAVRDGS AARDELSGST ITLTSMGPLG GIVSTPVINH
PEVAILNPNK LVDRPMVQGS FITVRKMMNL SSAFDHRIVD GYDAALFVQR VKRLLEHPAL
IFMD