Gene Caul_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1871 
Symbol 
ID5899326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2006761 
End bp2007774 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID641562361 
Producttransketolase central region 
Protein accessionYP_001683498 
Protein GI167645835 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA TGAACATGAT CCAGGCGCTC AATTCGGCGC TCGATGTGAT GCTGACCGAG 
GATCCCGACA CTCTGATCTT CGGCGAGGAC GTCGGCTATT TCGGCGGTGT CTTCCGCGTG
ACCGACGGCC TGCAGAAGAA GCATGGCCGC ACGCGCTGTT TCGACGCGCC GATCTCGGAA
GGCGGCATCA TCGCCGCCGC GATCGGCATG GGGGCGTATG GCCTGAGGCC GATTCCCGAA
ATCCAGTTCG CCGACTACAT CCTGCCGGCG TTCGACCAAC TGGTGTCGGA GGCGGCGCGC
CTTAGATACC GGTCAAACGG CGAGTTCTGG GCCCCGATCA CAGTGCGCTC GCCCTATGGC
GGCGGCATCT TCGGCGGCCA GACCCACAGC CAGTCCCCGG AAGCGATCTT CGCCCATATC
ACGGGCCTGA AGACCGTCAT TCCCTCCAAC CCCTATGACG CCAAGGGCCT GCTGATCGCC
TCGATCGAGG ACGACGATCC GGTGATCTTT CTGGAGCCCA AGCGGCTCTA CAACGGCCCA
TTCGACGGGC GGCACGAGCA GGCGCTGAAG ACCTGGGCCG GTGAGCCGAC CGCGGAGGTT
CCGTCCGGGC GCTACACCGT GCCGCTCGGC AAGGCGGCTA TTGTCCGCGA GGGCCTCGAG
GCGACGGTGC TGGCCTATGG CACGATGGTC CATGTGGCCC TGGCCGGGAT CGAGGACAGC
GGCGTGGACG CCGAACTGAT CGACTTGCGC TCGATCGTGC CGCTGGACGT CGATGCGATC
GTCGCGTCGG TCAAGAAGAC CGGTCGATGC GTGATCCTGC ATGAAGCGTC GCGGTTCGGC
GGTTTCGGGG GCGAGCTTTC GGCCCTCGTT CAGGAACGCT GCTTCTATCA CCTGAAGAGC
GCCGTGCAGC GGGTCGCGGG CTGGGACACG CCTTACCCGC ATGCATTCGA GTGGGACTAC
TTCCCCGGGC CCGCAAGGCT GGCGACGGCG CTTAAGCGCG CGATGGAGGA CTAG
 
Protein sequence
MPTMNMIQAL NSALDVMLTE DPDTLIFGED VGYFGGVFRV TDGLQKKHGR TRCFDAPISE 
GGIIAAAIGM GAYGLRPIPE IQFADYILPA FDQLVSEAAR LRYRSNGEFW APITVRSPYG
GGIFGGQTHS QSPEAIFAHI TGLKTVIPSN PYDAKGLLIA SIEDDDPVIF LEPKRLYNGP
FDGRHEQALK TWAGEPTAEV PSGRYTVPLG KAAIVREGLE ATVLAYGTMV HVALAGIEDS
GVDAELIDLR SIVPLDVDAI VASVKKTGRC VILHEASRFG GFGGELSALV QERCFYHLKS
AVQRVAGWDT PYPHAFEWDY FPGPARLATA LKRAMED