Gene Caul_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1800 
Symbol 
ID5899255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1902112 
End bp1902975 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID641562290 
Producttaurine catabolism dioxygenase TauD/TfdA 
Protein accessionYP_001683427 
Protein GI167645764 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.971023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0172073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATGA CGCTCGCCGA CGACCTGACG ATCTCCGAAT TGAAGCCCGG CTTCGGGGCC 
CAGATCCACG ACATCGACCT GCCGTCCTCG TCGGACGCCG AGATCGACAA GGTGGTCGCC
GCCTTCCACC GCCATGGCGC CGTGGTGCTG CGCGGCCAGG ACATGACGCC CGACGACCTG
ATGCGCTTCA TCGGCCGGTT CGGCGACGCC GAGGACCACA CCCAGACCCG CTTCACCCTG
CCCGGCTATC CCAAGATCTT CATCCTCAGC AACCGGGTCG TGGACGGCAA GCCGCTCGGC
GCCCACAACG ACGGCGTCGG CTGGCATACC GACTATAGCT ACAAGCCCGA GCCGGTGATG
CTGACCATGC TCTACGCGGT GGAAGTGCCC GACGAGGGTT CCGACACTCT GCTGGCTGAC
GGCTGCGCCG CCTGGAACGC CCTGTCGCCG GAGAAGCAGG CCGAGCTCCT GCCGCTGAGC
CTTCATCACA GCTACAAGCA CTTCATGGCC ACCCGGCAGT TTGGCCAGCA GCAGACGCTG
TCGCCAGAGC TGGAGGCGGC CAATCCCGAC GTCGAGCACC CGCTGATCCG CACCCACCCG
GCCGATGGCC GCAAGGCGTT GTGGCCCTCG ACCGGAACTG TGACCGAGGT GATCGGCAAG
CCCGGCCCCG AAGGCCTGGC CCTGCTCGAC GAACTGGTTG AGTTCATGAC CGGCGACGAC
TTCGTCTATC GCCACAAGTG GGCCAAGGGC GACCTGCTGA TGTGGGACAA CCGCTGCACC
CTGCACACCG GGACGCTCTA CGACGACACC AAGTATTTCC GGACCATGCA CCGCCTGTGG
GTGAAGGGCG ACAAGCCGGT TTAG
 
Protein sequence
MDMTLADDLT ISELKPGFGA QIHDIDLPSS SDAEIDKVVA AFHRHGAVVL RGQDMTPDDL 
MRFIGRFGDA EDHTQTRFTL PGYPKIFILS NRVVDGKPLG AHNDGVGWHT DYSYKPEPVM
LTMLYAVEVP DEGSDTLLAD GCAAWNALSP EKQAELLPLS LHHSYKHFMA TRQFGQQQTL
SPELEAANPD VEHPLIRTHP ADGRKALWPS TGTVTEVIGK PGPEGLALLD ELVEFMTGDD
FVYRHKWAKG DLLMWDNRCT LHTGTLYDDT KYFRTMHRLW VKGDKPV