Gene Caul_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1708 
Symbol 
ID5899163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1797920 
End bp1798891 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content74% 
IMG OID641562198 
ProductABC transporter related 
Protein accessionYP_001683335 
Protein GI167645672 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.249646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.361745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG AGCCTGTCCC GGCCGAGCCT ATCCTGGCGG CGCCCATCCT GACGGTGAAG 
GGCGCGACTC ACGCCTATGG CGGCAAGCCG GTGCTGCGCG ACGTCGACCT GGTCCTGCGG
CCCGGCGAGA TCTACGCCCT GCTGGGTCCC AACGGCGCCG GCAAGACCAC TTTGCTGCGG
ACGATCTGCG GTCGCATCCG GCCCGATGGC GGCAGCGTGC TGCTGAACGG CCGCGACCCG
GCCCGCGTCC CGGCCGCCCG CGCCGGCCTG GGCCTGGTCC CGCAGGAGAT CGCGCTCTAC
CAGAACCTGA CGGTGGCCGA GAACGTCGAG ACCTTCGCCG CCCTGGCCGG CATGCCGCGC
GCCGCCGTGG CGTCGGCGGT CCGGCGCGCG CTGGAGGTCA CCCGCACGCT CGACCGCGCC
CACGTGCCGG TCAAGCACCT GTCGGGCGGC TACCAGCGTC GCGCCAACAT CGCCGCCGCC
ATCGTCCACG ACCCGGCGCT GCTGATTCTC GACGAGCCCA CCGTCGGGGT CGATATCGAC
GCCCGCGAGG CGGTGGACGC GGTGATCCGG GGCCTGCGCG ACCTGGGGGT AGCGGTGCTG
ATGACCACCC ACGACCTGGA CCAGGCCGGC GCCCTGGCCG ATCGGGTCGG CTTCCTGCGC
GAGGGCCAGA TGATGCTGGA GGGCGAGCCC CGGGGCCTGA TCACCGAGGC GTTCGGCGGC
CAGATGGAGA TCCTGGTCCA ACTGGTCGGC GACGTCGACA CAGCCGGCGA GATCCTGATG
GCCGGCGAGG GGCTGCGGCC CACGGGGCGG CCCTTGATCT GGAGCCGGCT GGACGCCGAC
GGCTACGCCG CCGCTGGGCG GCTGGACAAG CGCCTGCGCG AGATCGGGCT GGCGCCGCGC
GAGATCCGGG TGCGCGCGCC GTCCCTGGCC AACCTCTTCA CCCTGGTGAC CTCGCGGGAT
CAGGCGGCAT GA
 
Protein sequence
MTAEPVPAEP ILAAPILTVK GATHAYGGKP VLRDVDLVLR PGEIYALLGP NGAGKTTLLR 
TICGRIRPDG GSVLLNGRDP ARVPAARAGL GLVPQEIALY QNLTVAENVE TFAALAGMPR
AAVASAVRRA LEVTRTLDRA HVPVKHLSGG YQRRANIAAA IVHDPALLIL DEPTVGVDID
AREAVDAVIR GLRDLGVAVL MTTHDLDQAG ALADRVGFLR EGQMMLEGEP RGLITEAFGG
QMEILVQLVG DVDTAGEILM AGEGLRPTGR PLIWSRLDAD GYAAAGRLDK RLREIGLAPR
EIRVRAPSLA NLFTLVTSRD QAA