Gene Caul_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1701 
Symbol 
ID5899156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1789735 
End bp1791615 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content72% 
IMG OID641562191 
Product1A family penicillin-binding protein 
Protein accessionYP_001683328 
Protein GI167645665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.41226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0892672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGA TGGAAGCGAA GACCCGGCTG GCGTCCGCCT GGGCCGCCGC GCGCGCCTTC 
GCGGTCCGCC ACCGGCTGTG GTTCGGAGCC GGACTGGGGG CGTTGCTGCC GCTGGCGGTG
TTGCTGGTCT GGCTGGGCGC GAGCCTGCCG ATTTCGCGGG CGCTGGAGCC CTTGCCTAGC
CGGGCGATCA TCCTGCTCGA CAACCAGGGG CAGCCCTTTG CCCGGCGCGG CGCCTACAAG
GAGCCGCCGG TGGTGATCAA GGCGTTGCCG CCGCACGTGC CGGCCGCCTT CCTGGCCATC
GAGGATCGCC GGTTCTACCA CCACCTGGGG ATCGACCCAG TGGGGATCGT CCGCGCCTTC
GTGGTCAACG CCAAGGCCCA CCGCACCGTC CAGGGCGGCA GCACCATCAC CCAGCAACTG
GCCAAGAACG CCTTCCTCAA GCCCGAGCGC AGCCTGCGCC GCAAGGGCCA GGAGGCGATG
ATCGCCCTGT GGCTGGAGCT GAGGCTGTCC AAGGACGAGA TCCTGTCGCG CTATCTCTCC
AGCATCTATT TCGGCGACGG GGTCTACGGC CTGGGCGCGG CGGCGCGGCA CTATTTCGGC
AAGCCGCCGG AGCAACTGTC GATCGGCGAG GCGGCGATGC TGGCCGGGAT CGTCAAGGCG
CCGGTCGATC TGGACCCGGT CGACCATGCC GACAAGGCCG GGGTCCGGGC GCGGCTGGTG
CTGGAGGCCA TGGTCGATAC CAAGGCGATC ACCCGCCAGC AGGCCGAGGC GGCGGGCCAC
GTGGCCGTAC GCACGACACG GGCCGACCTG CCCGTGGGCG GCTATTTCGC CGACTGGATC
TCGCCCCAGG TGAAGTCGGC CTTCGACGGT CCGGGCTATG GCGAGGTGCG GGTCCCGACC
ACGCTGGACA GTCGCCTGCA GCGCATCGTC GAGCGGGCGG TGGCCGGCGA GATGCGCGGC
GCGAGCAGGA TCCGGGCCGG GCAGGTGGCC GTGGTCGCCC TGCGGCCGGA CGGCCAGGTC
GTGGCCATGG TCGGCGGGAC GAACTATCGC CAGAGCCCGT TCAACCGCGC GGTCCAGGCC
CAGCGCCAGC CGGGCAGCGC CTTCAAGCTG TTCGTCTACC TGGCCGCCCT GCGCGACGGC
GCGACCCCCG ACAGCCTGAT GGTCGGCGCC CCCGTGACCA TCGGCGGCTG GACGCCCAGC
AACTACGAGG GCGGCGGCGG GCGCGACATG ACCCTGCGCG ACGCCTTCGC GGAATCCAAC
AACGTCATCG CCGCGCGGGT CTACCAGCAG GCCGGCGGCG AGGCCGTGGT GCGGGCGGCC
CGCGACCTGG GGATCGCCTC GCCGCTGCGC GAGGACGACG CCACCCTGGC CCTGGGCACG
GCCGAGACCA ACCTGCTGGA GCTGACCGGC GCCTATGCGG CGGTGGCCGC CGGCCAGATG
CCGATCCGAC CCTATGGCCG TCCGCCGCCG GCCCCGGCTC AGACCAAGCC GCTGGAGCCC
CTCGCGCGCG AAGCCCTGCT GGACATGATG GGGGCGGTGG TCGAGGAGGG CACTGGCCGC
GCCGCGCGCC TCCCCCAGCG GGCCTATGGC AAGACCGGCA CCACCCAGGA CTATCGCGAC
GCCCTGTTCA TCGGCTTCAC GGGCGACCTG GTGGTCGGGG TCTGGGTCGG CAACGACGAT
CACTCGCCGA TGAGCCGCGT GGTCGGAGGC GGTGTCCCAG CGCAGATCTG GCGCGACGTG
ATGACCGGCG GCCTGAAGGC GGGGCTGGTG GCGCGCGACC GCCCGCCAGA GCCGCGCTAT
GCGCCCGAGC CGGAGGAGGA GCGGGAGGTG GAGCGCCCGC GCCATGTGCC GAAATGGCTG
CGGCGGATCT TTGGGCTGTG A
 
Protein sequence
MILMEAKTRL ASAWAAARAF AVRHRLWFGA GLGALLPLAV LLVWLGASLP ISRALEPLPS 
RAIILLDNQG QPFARRGAYK EPPVVIKALP PHVPAAFLAI EDRRFYHHLG IDPVGIVRAF
VVNAKAHRTV QGGSTITQQL AKNAFLKPER SLRRKGQEAM IALWLELRLS KDEILSRYLS
SIYFGDGVYG LGAAARHYFG KPPEQLSIGE AAMLAGIVKA PVDLDPVDHA DKAGVRARLV
LEAMVDTKAI TRQQAEAAGH VAVRTTRADL PVGGYFADWI SPQVKSAFDG PGYGEVRVPT
TLDSRLQRIV ERAVAGEMRG ASRIRAGQVA VVALRPDGQV VAMVGGTNYR QSPFNRAVQA
QRQPGSAFKL FVYLAALRDG ATPDSLMVGA PVTIGGWTPS NYEGGGGRDM TLRDAFAESN
NVIAARVYQQ AGGEAVVRAA RDLGIASPLR EDDATLALGT AETNLLELTG AYAAVAAGQM
PIRPYGRPPP APAQTKPLEP LAREALLDMM GAVVEEGTGR AARLPQRAYG KTGTTQDYRD
ALFIGFTGDL VVGVWVGNDD HSPMSRVVGG GVPAQIWRDV MTGGLKAGLV ARDRPPEPRY
APEPEEEREV ERPRHVPKWL RRIFGL